RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 HS2ST1Q7LGA3 356 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 KSR1Q8IVT5 923 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 ART4Q93070 314 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 CTTNBP2NLQ9P2B4 639 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 SEL1LQ9UBV2 794 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 RASGRF2O14827 1237 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 OAS1P00973 400 aaKnown RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 FGFR4P22455 802 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 CYP2J2P51589 502 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 SNAP25P60880 206 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 E2F5Q15329 346 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 ZNF568Q3ZCX4 644 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 CCDC137Q6PK04 289 aaKnown RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 SLC20A1Q8WUM9 679 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 NSRP1Q9H0G5 558 aaKnown RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 IGLV3-22A0A075B6J6 115 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 FAM170AA1A519 330 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 LRRN2O75325 713 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 MTA2O94776 668 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 VIMP08670 466 aaKnown RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 GPC5P78333 572 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 BFSP1Q12934 665 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 CYFIP1Q7L576 1253 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SIAH1Q8IUQ4 282 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SLC9A9Q8IVB4 645 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 MORC4Q8TE76 937 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 CD101Q93033 1021 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 ANKRD63C9JTQ0 380 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SNX3O60493 162 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 BCRP11274 1271 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 COMTP21964 271 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 COILP38432 576 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SLCO1A2P46721 670 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 NFIAQ12857 509 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 USH1GQ495M9 461 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SEL1L2Q5TEA6 688 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 STXBP4Q6ZWJ1 553 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 TAOK1Q7L7X3 1001 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 UHMK1Q8TAS1 419 aaKnown RBP12.39□□□□□ -0.43
PTPRK-217ENST00000524534 DYDC2Q96IM9 177 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SUFUQ9UMX1 484 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
PTPRK-217ENST00000524534 BTAF1O14981 1849 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 ZBTB39O15060 712 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 PYGMP11217 842 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 PDE6CP51160 858 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 SIX1Q15475 284 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 EXOC3L1Q86VI1 746 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 FAM178BQ8IXR5 827 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 MIEF2Q96C03 454 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 STRA6Q9BX79 667 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 ABCF3Q9NUQ8 709 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 DBR1Q9UK59 544 aaKnown RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 AGAP1Q9UPQ3 857 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 LTBP1Q14766 1721 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 TCRBV7S2A1N4TA0A589 114 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 RTN2O75298 545 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 PSMD10O75832 226 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 IBSPP21815 317 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 ZNF76P36508 570 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 IFNAR2P48551 515 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 SF3A3Q12874 501 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 MYBPC2Q14324 1141 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 ZNF268Q14587 947 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 GALNTL6Q49A17 601 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 HHIPL2Q6UWX4 724 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 SLC13A5Q86YT5 568 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 C12orf50Q8NA57 414 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 WDR18Q9BV38 432 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 EBF2Q9HAK2 575 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 UBE2TQ9NPD8 197 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-217ENST00000524534 CEP83Q9Y592 693 aa12.38□□□□□ -0.43
PTPRK-217ENST00000524534 TMEM110-MUSTN1A8MSY1 372 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
PTPRK-217ENST00000524534 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms