RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 KRT17Q04695 432 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 TRIM29Q14134 588 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 NCAPH2Q6IBW4 605 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 CATSPER4Q7RTX7 472 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 MRPL10Q7Z7H8 261 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 PRPF31Q8WWY3 499 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 IGSF21Q96ID5 467 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 MRPL9Q9BYD2 267 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 SMC3Q9UQE7 1217 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 MTCL1Q9Y4B5 1905 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 TMEM221A6NGB7 291 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 M0R296 226 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 SLITRK3O94933 977 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 CXCL14O95715 111 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 SRGAP2CP0DJJ0 459 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 ALDH7A1P49419 539 aaKnown RBP10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 POLGP54098 1239 aaPredicted RBP10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 NHLH1Q02575 133 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 LAMTOR4Q0VGL1 99 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 SMC1AQ14683 1233 aaKnown RBP10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 EMC2Q15006 297 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 IER5LQ5T953 404 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 BMP8AQ7Z5Y6 402 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 FERMT3Q86UX7 667 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 VPS52Q8N1B4 723 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 C12orf76Q8N812 135 aaPredicted RBP10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 ASIC4Q96FT7 647 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 INO80BQ9C086 356 aaPredicted RBP10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 POMKQ9H5K3 350 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 BRMS1Q9HCU9 246 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
CNKSR1-209ENST00000524529 A0A087WWV3 80 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 FSD2A1L4K1 749 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 CTSAP10619 480 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 EPCAMP16422 314 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 HOXB8P17481 243 aaPredicted RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 PDCP20941 246 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 GJB2P29033 226 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 KRT2P35908 639 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 RFC5P40937 340 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 SAFBQ15424 915 aaKnown RBP eCLIP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 AMHR2Q16671 573 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 XKR9Q5GH70 373 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 GLB1LQ6UWU2 654 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 SRGAP1Q7Z6B7 1085 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 DDX53Q86TM3 631 aaKnown RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 RNF149Q8NC42 400 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 FBXO18Q8NFZ0 1043 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 ASAP3Q8TDY4 903 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 SLC22A17Q8WUG5 538 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 PSPC1Q8WXF1 523 aaKnown RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 SLC7A3Q8WY07 619 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 CASP10Q92851 521 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 TMEM169Q96HH4 297 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 C8orf76Q96K31 380 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 HSD17B14Q9BPX1 270 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 EIF2AK1Q9BQI3 630 aaKnown RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 JPH2Q9BR39 696 aaPredicted RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 EIF2AQ9BY44 585 aaKnown RBP10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 KCNH6Q9H252 994 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 TMEM60Q9H2L4 133 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 ADAM7Q9H2U9 754 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 MIOSQ9NXC5 875 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 PPME1Q9Y570 386 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 IRAK3Q9Y616 596 aa10.75□□□□□ -0.69
CNKSR1-209ENST00000524529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 C2CD4DB7Z1M9 353 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 TSPAN1O60635 241 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 DKC1O60832 514 aaKnown RBP eCLIP10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 LILRB3O75022 631 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 LYPLA2O95372 231 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 SKIP12755 728 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 RAB27AP51159 221 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 PTENP60484 403 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 PTPN14Q15678 1187 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 IFNLR1Q8IU57 520 aaPredicted RBP10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 TPH2Q8IWU9 490 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 SLFN12Q8IYM2 578 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 PRSS33Q8NF86 280 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 MTMR9Q96QG7 549 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 PHOX2BQ99453 314 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 MTRQ99707 1265 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 SMOC2Q9H3U7 446 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 ZSWIM4Q9H7M6 989 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 RSAD1Q9HA92 442 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 MARCH5Q9NX47 278 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 HES2Q9Y543 173 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 VWA8A3KMH1 1905 aa10.74□□□□□ -0.69
CNKSR1-209ENST00000524529 POTEMA6NI47 508 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms