RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 A0A1B0GUA9 196 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 LCHNA4D1U4 455 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 H0YCG3 227 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 ATF7P17544 494 aaPredicted RBP16.67■□□□□ 0.26
SF3B2-202ENST00000524475 ARF4P18085 180 aaPredicted RBP16.67■□□□□ 0.26
SF3B2-202ENST00000524475 PEX3P56589 373 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 ERVK-21P61565 698 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 GIT2Q14161 759 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 MRPL10Q7Z7H8 261 aaKnown RBP16.67■□□□□ 0.26
SF3B2-202ENST00000524475 IQUBQ8NA54 791 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 CNNM3Q8NE01 707 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 CLP1Q92989 425 aaKnown RBP16.67■□□□□ 0.26
SF3B2-202ENST00000524475 TNMDQ9H2S6 317 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 PARVGQ9HBI0 331 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 NLRC5Q86WI3 1866 aa16.67■□□□□ 0.26
SF3B2-202ENST00000524475 ZMYM2Q9UBW7 1377 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 ARHGEF15O94989 841 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 PRKCBP05771 671 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
SF3B2-202ENST00000524475 CMA1P23946 247 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 ABCD1P33897 745 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 SMTNP53814 917 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 UBXN11Q5T124 520 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 SLC17A8Q8NDX2 589 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 TGS1Q96RS0 853 aaKnown RBP16.66■□□□□ 0.26
SF3B2-202ENST00000524475 LRRC27Q9C0I9 530 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 KMT5AQ9NQR1 393 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 KBTBD4Q9NVX7 518 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 RWDD3Q9Y3V2 267 aa16.66■□□□□ 0.26
SF3B2-202ENST00000524475 A0A1W2PQ27 194 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 A0A1W2PQ64 194 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 A0A1W2PQD8 194 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 K7ERI5 159 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 LINC00271P0C7V0 271 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 NCKAP1LP55160 1127 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 SLC27A1Q6PCB7 646 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 Q7L0L9 218 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 FIBCD1Q8N539 461 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 TMEM161BQ8NDZ6 487 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 POLD4Q9HCU8 107 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 RNF19AQ9NV58 838 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 SEL1LQ9UBV2 794 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 HPSEQ9Y251 543 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 PCDHB2Q9Y5E7 798 aa16.65■□□□□ 0.26
SF3B2-202ENST00000524475 NPHP3-ACAD11A0A0J9YXS1 232 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 FRMD3A2A2Y4 597 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 MYMKA6NI61 221 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 CCDC169A6NNP5 214 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 N4BP3O15049 544 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 B4GALT5O43286 388 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 TBCAO75347 108 aaKnown RBP16.64■□□□□ 0.25
SF3B2-202ENST00000524475 FAM13AO94988 1023 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 KRT18P05783 430 aaKnown RBP16.64■□□□□ 0.25
SF3B2-202ENST00000524475 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
SF3B2-202ENST00000524475 RAD51AP2Q09MP3 1159 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.25
SF3B2-202ENST00000524475 BTG3Q14201 252 aaPredicted RBP16.64■□□□□ 0.25
SF3B2-202ENST00000524475 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
SF3B2-202ENST00000524475 PDILTQ8N807 584 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 DDX12PQ92771 950 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 DNAJC19Q96DA6 116 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 GUCD1Q96NT3 240 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 KIFC3Q9BVG8 833 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
SF3B2-202ENST00000524475 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 CARNS1A5YM72 827 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 SFI1A8K8P3 1242 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 C5orf67F2Z3F1 127 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 INPPL1O15357 1258 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
SF3B2-202ENST00000524475 RB1P06400 928 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 GAP43P17677 238 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 AMPD3Q01432 767 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 CLLU1OSQ5K130 101 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 TAS1R3Q7RTX0 852 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 CPB2Q96IY4 423 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 CHAMP1Q96JM3 812 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 CASD1Q96PB1 797 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 FIZ1Q96SL8 496 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 MRPL9Q9BYD2 267 aaKnown RBP16.63■□□□□ 0.25
SF3B2-202ENST00000524475 MRPL4Q9BYD3 311 aaKnown RBP16.63■□□□□ 0.25
SF3B2-202ENST00000524475 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 PDZD7Q9H5P4 517 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 KCNH3Q9ULD8 1083 aa16.63■□□□□ 0.25
SF3B2-202ENST00000524475 SLC16A4O15374 487 aa16.62■□□□□ 0.25
SF3B2-202ENST00000524475 EDN1P05305 212 aa16.62■□□□□ 0.25
SF3B2-202ENST00000524475 POU3F3P20264 500 aaPredicted RBP16.62■□□□□ 0.25
SF3B2-202ENST00000524475 DCAF4L1Q3SXM0 396 aa16.62■□□□□ 0.25
SF3B2-202ENST00000524475 NT5DC1Q5TFE4 455 aa16.62■□□□□ 0.25
SF3B2-202ENST00000524475 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
SF3B2-202ENST00000524475 AGMOQ6ZNB7 445 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms