RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 OFD1O75665 1012 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 VCAM1P19320 739 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 ECE1P42892 770 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 MLLT6P55198 1093 aaPredicted RBP7.5□□□□□ -1.21
SKP1-213ENST00000524288 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
SKP1-213ENST00000524288 GRAMD1CQ8IYS0 662 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 CALML6Q8TD86 181 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 IGDCC4Q8TDY8 1250 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 ZCCHC14Q8WYQ9 949 aaKnown RBP7.5□□□□□ -1.21
SKP1-213ENST00000524288 RPGRQ92834 1020 aaKnown RBP7.5□□□□□ -1.21
SKP1-213ENST00000524288 PRDM11Q9NQV5 511 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 GALNT8Q9NY28 637 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 PRSS50Q9UI38 385 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 FAM50BQ9Y247 325 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 NUMBLQ9Y6R0 609 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 ZNF536O15090 1300 aa7.5□□□□□ -1.21
SKP1-213ENST00000524288 FRMPD2Q68DX3 1309 aaPredicted RBP7.5□□□□□ -1.21
SKP1-213ENST00000524288 MTHFD2P13995 350 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 SLC5A3P53794 718 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 ADKP55263 362 aaKnown RBP7.49□□□□□ -1.21
SKP1-213ENST00000524288 IL13RA1P78552 427 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 SPIDRQ14159 915 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 B3GNT9Q6UX72 402 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 THEMISQ8N1K5 641 aaPredicted RBP7.49□□□□□ -1.21
SKP1-213ENST00000524288 DTX3Q8N9I9 347 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 TAAR9Q96RI9 348 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 NOL10Q9BSC4 688 aaKnown RBP7.49□□□□□ -1.21
SKP1-213ENST00000524288 SSBP3Q9BWW4 388 aaPredicted RBP7.49□□□□□ -1.21
SKP1-213ENST00000524288 ACE2Q9BYF1 805 aaPredicted RBP7.49□□□□□ -1.21
SKP1-213ENST00000524288 BARX1Q9HBU1 254 aaPredicted RBP7.49□□□□□ -1.21
SKP1-213ENST00000524288 DMRT3Q9NQL9 472 aa7.49□□□□□ -1.21
SKP1-213ENST00000524288 C1QTNF3-AMACRE9PGA6 284 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 TPD52L2O43399 206 aaKnown RBP7.48□□□□□ -1.21
SKP1-213ENST00000524288 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 TRMT10BQ6PF06 316 aaKnown RBP7.48□□□□□ -1.21
SKP1-213ENST00000524288 GAREM2Q75VX8 874 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 SLC41A1Q8IVJ1 513 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 WDR48Q8TAF3 677 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 SLC35G2Q8TBE7 412 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 RUNDC1Q96C34 613 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 PSMD1Q99460 953 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 MPHOSPH6Q99547 160 aaKnown RBP7.48□□□□□ -1.21
SKP1-213ENST00000524288 ARHGAP20Q9P2F6 1191 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 EVLQ9UI08 416 aaPredicted RBP7.48□□□□□ -1.21
SKP1-213ENST00000524288 ZFP69BQ9UJL9 534 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 DNM3Q9UQ16 869 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 PCDHB6Q9Y5E3 794 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 CDY2AQ9Y6F7 541 aa7.48□□□□□ -1.21
SKP1-213ENST00000524288 CTNND1O60716 968 aaKnown RBP7.47□□□□□ -1.21
SKP1-213ENST00000524288 OPHN1O60890 802 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 IL18BPO95998 194 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 APEX1P27695 318 aaKnown RBP7.47□□□□□ -1.21
SKP1-213ENST00000524288 ADCY8P40145 1251 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 GALEQ14376 348 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 ZBTB34Q8NCN2 500 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 OR14C36Q8NHC7 312 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 NRG4Q8WWG1 115 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 GAB3Q8WWW8 586 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 SSH1Q8WYL5 1049 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 COA7Q96BR5 231 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 ACO2Q99798 780 aaKnown RBP7.47□□□□□ -1.21
SKP1-213ENST00000524288 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 WNT8AQ9H1J5 351 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 OR10A5Q9H207 317 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 DENND2AQ9ULE3 1009 aa7.47□□□□□ -1.21
SKP1-213ENST00000524288 A6NNZ2 444 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 ERC2O15083 957 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 POU2F2P09086 479 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 COL6A1P12109 1028 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 INSRRP14616 1297 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 AKAP5P24588 427 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 EPHB4P54760 987 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 BCAR1P56945 870 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 CD83Q01151 205 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 NFATC3Q12968 1075 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 BIRC2Q13490 618 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 GBX1Q14549 363 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 KBTBD2Q8IY47 623 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 CDYL2Q8N8U2 506 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 CHST13Q8NET6 341 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 HPS3Q969F9 1004 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 RPS6KC1Q96S38 1066 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 BTBD2Q9BX70 525 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 LIMCH1Q9UPQ0 1083 aa7.46□□□□□ -1.22
SKP1-213ENST00000524288 CCDC154A6NI56 674 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 ZNF20P17024 532 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 PDCP20941 246 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 PPP2CBP62714 309 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 PPP2CAP67775 309 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 HLTFQ14527 1009 aaKnown RBP eCLIP7.45□□□□□ -1.22
SKP1-213ENST00000524288 LLGL1Q15334 1064 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 IL31Q6EBC2 164 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 ARHGEF18Q6ZSZ5 1173 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.45□□□□□ -1.22
SKP1-213ENST00000524288 OR5AN1Q8NGI8 311 aa7.45□□□□□ -1.22
SKP1-213ENST00000524288 DIS3LQ8TF46 1054 aaKnown RBP7.45□□□□□ -1.22
SKP1-213ENST00000524288 DPF2Q92785 391 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms