RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 HPS3Q969F9 1004 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 RNF25Q96BH1 459 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 KLHL29Q96CT2 875 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 TBC1D31Q96DN5 1066 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 SPDL1Q96EA4 605 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 SERPINB12Q96P63 405 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 TMEM237Q96Q45 408 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 ELAC2Q9BQ52 826 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 SELENOSQ9BQE4 189 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 AP1M1Q9BXS5 423 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 TMX4Q9H1E5 349 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 AZI2Q9H6S1 392 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 MKNK2Q9HBH9 465 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 ZNF287Q9HBT7 754 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 POLD4Q9HCU8 107 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 IL17RBQ9NRM6 502 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 TXLNGQ9NUQ3 528 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 USP40Q9NVE5 1235 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 GRHL1Q9NZI5 618 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 ZFATQ9P243 1243 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 ABCF2Q9UG63 623 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 PCYOX1Q9UHG3 505 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 PACSIN2Q9UNF0 486 aaPredicted RBP5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 AGAP1Q9UPQ3 857 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 ATP8A1Q9Y2Q0 1164 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 ACTL7BQ9Y614 415 aa5.34□□□□□ -1.55
CTNNA1-241ENST00000524127 THSD7BQ9C0I4 1608 aa5.34□□□□□ -1.56
CTNNA1-241ENST00000524127 BAZ2AQ9UIF9 1905 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RPTORQ8N122 1335 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SYNGAP1Q96PV0 1343 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SIPA1L1O43166 1804 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SPDYE3A6NKU9 549 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 KLRF2D3W0D1 207 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SMIM22K7EJ46 135 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 IGF2BP3O00425 579 aaKnown RBP eCLIP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 DDX3XO00571 662 aaKnown RBP eCLIP5.33□□□□□ -1.563e-10■■■■□ 25.2
CTNNA1-241ENST00000524127 WNT10BO00744 389 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PDXKO00764 312 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 TRAFD1O14545 582 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RASGRF2O14827 1237 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 HNRNPCL1O60812 293 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 DIAPH2O60879 1101 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 HIP1RO75146 1068 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ATP2C2O75185 946 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 LMNAP02545 664 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 FGGP02679 453 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 NEFHP12036 1026 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PECAM1P16284 738 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 GNAZP19086 355 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RFX1P22670 979 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RPS12P25398 132 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 CTNNA2P26232 953 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RPL13P26373 211 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PON1P27169 355 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 CNGA1P29973 690 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 HIBADHP31937 336 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 TXKP42681 527 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PTGIRP43119 386 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 MSH2P43246 934 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 GCLCP48506 637 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 DNA2P51530 1060 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ADCY7P51828 1080 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PPP4CP60510 307 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ROR2Q01974 943 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 CAV1Q03135 178 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ADAM9Q13443 819 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 AUHQ13825 339 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 CYP1B1Q16678 543 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 EXOC3L4Q17RC7 722 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ANKRD20A2Q5SQ80 823 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ANKRD20A1Q5TYW2 823 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ANKRD20A3Q5VUR7 823 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PRAMEF18Q5VWM3 479 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 PPP1R21Q6ZMI0 780 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SYDE1Q6ZW31 735 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 MOB2Q70IA6 237 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 EPM2AIP1Q7L775 607 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 DYMQ7RTS9 669 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SPATA21Q7Z572 469 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 DAAM2Q86T65 1068 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 JAMLQ86YT9 394 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 KIAA0825Q8IV33 1275 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RHOT2Q8IXI1 618 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 LMNTD2Q8IXW0 634 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ENDOVQ8N8Q3 282 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 C12orf50Q8NA57 414 aaPredicted RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 NEDD1Q8NHV4 660 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SCFD1Q8WVM8 642 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 INPP5DQ92835 1189 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SLCO2A1Q92959 643 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ART4Q93070 314 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 THOC1Q96FV9 657 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 EEF2KMTQ96G04 330 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 RPS6KC1Q96S38 1066 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 ZIC5Q96T25 663 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 TMEM47Q9BQJ4 181 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SYT11Q9BT88 431 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 GLT8D2Q9H1C3 349 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 LRMDAQ9H2I8 198 aa5.33□□□□□ -1.56
CTNNA1-241ENST00000524127 SLC24A3Q9HC58 644 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms