RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 SHCBP1Q8NEM2 672 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 NPLOC4Q8TAT6 608 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 ADAM32Q8TC27 787 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 PIK3R5Q8WYR1 880 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 KAT2BQ92831 832 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 ARL8AQ96BM9 186 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 ATG4CQ96DT6 458 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 MTMR8Q96EF0 704 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 CCDC42Q96M95 316 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 CAPS2Q9BXY5 557 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 NDST4Q9H3R1 872 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 ZNF287Q9HBT7 754 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 RNF14Q9UBS8 474 aa8.55□□□□□ -1.04
SPIDR-223ENST00000524033 ZMYND8Q9ULU4 1186 aaPredicted RBP8.55□□□□□ -1.04
SPIDR-223ENST00000524033 RBBP6Q7Z6E9 1792 aaKnown RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 LRRC53A6NM62 1247 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 BTNL10A8MVZ5 291 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 hCG_1984214I3L0E3 225 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 VWA5AO00534 786 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 CES2O00748 559 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 NOL4O94818 638 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 SLC25A27O95847 323 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 COL6A1P12109 1028 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 SYN1P17600 705 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 RFX1P22670 979 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 GUCY2CP25092 1073 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 BMP8BP34820 402 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 CCT5P48643 541 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 GNGT1P63211 74 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 AMPD3Q01432 767 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 TMEM132BQ14DG7 1078 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 CCDC96Q2M329 555 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 HYIQ5T013 277 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 OLFML2BQ68BL8 750 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 IQCKQ8N0W5 287 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 ZNF444Q8N0Y2 327 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 CNPY4Q8N129 248 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 ZNF713Q8N859 430 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 TRPV1Q8NER1 839 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 ZIM3Q96PE6 472 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 ALS2CR12Q96Q35 445 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 PLIN2Q99541 437 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 TMEM47Q9BQJ4 181 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 SENP6Q9GZR1 1112 aaPredicted RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 GANQ9H2C0 597 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 PLEKHA4Q9H4M7 779 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 ALG2Q9H553 416 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 RBM12Q9NTZ6 932 aaKnown RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 SMARCAL1Q9NZC9 954 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 CEP72Q9P209 647 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 DDX20Q9UHI6 824 aaKnown RBP8.54□□□□□ -1.04
SPIDR-223ENST00000524033 TMEM59LQ9UK28 342 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 NENFQ9UMX5 172 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 ADAMTS5Q9UNA0 930 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 PCDHGC5Q9Y5F6 944 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 PHIPQ8WWQ0 1821 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 PFASO15067 1338 aa8.54□□□□□ -1.04
SPIDR-223ENST00000524033 F5H6K3 240 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 PES1O00541 588 aaKnown RBP8.53□□□□□ -1.04
SPIDR-223ENST00000524033 SLC26A4O43511 780 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 NCK2O43639 380 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 HSF2BPO75031 334 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 IGHA2P01877 340 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 HSPA9P38646 679 aaKnown RBP8.53□□□□□ -1.04
SPIDR-223ENST00000524033 STAT3P40763 770 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 SLC1A4P43007 532 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 MAGEA1P43355 309 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 FNTAP49354 379 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 MCCD1P59942 119 aaPredicted RBP8.53□□□□□ -1.04
SPIDR-223ENST00000524033 KLRC3Q07444 240 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 PAK2Q13177 524 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 PSMD2Q13200 908 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 LRRC26Q2I0M4 334 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 PRAMEF19Q5SWL8 479 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 FAM83BQ5T0W9 1011 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 DPY19L2P1Q6NXN4 242 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 C8orf74Q6P047 294 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 KCNV1Q6PIU1 500 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 MMS22LQ6ZRQ5 1243 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 HEATR3Q7Z4Q2 680 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 ARRDC4Q8NCT1 418 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 ADAMTS19Q8TE59 1207 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 LARP4BQ92615 738 aaKnown RBP8.53□□□□□ -1.04
SPIDR-223ENST00000524033 RAD54LQ92698 747 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 FOXJ1Q92949 421 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 ZBTB9Q96C00 473 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 DNAJC19Q96DA6 116 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 CEP63Q96MT8 703 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 GDAP1L1Q96MZ0 367 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 GDF15Q99988 308 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 RIC8AQ9NPQ8 531 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 JADE2Q9NQC1 790 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 FBXO28Q9NVF7 368 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 EHD2Q9NZN4 543 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 NYAP2Q9P242 653 aa8.53□□□□□ -1.04
SPIDR-223ENST00000524033 GGA2Q9UJY4 613 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms