RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 C6orf222P0C671 652 aaPredicted RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 MRPL12P52815 198 aaKnown RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 ACLYP53396 1101 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 FPGSQ05932 587 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 RING1Q06587 406 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 PPIGQ13427 754 aaKnown RBP eCLIP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 SHHQ15465 462 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 SFRP5Q5T4F7 317 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 ALKBH2Q6NS38 261 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 CCDC129Q6ZRS4 1044 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 TMEM199Q8N511 208 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 GMCL1P1Q8NEA9 526 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 REPS2Q8NFH8 660 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 STAG1Q8WVM7 1258 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 RNPC3Q96LT9 517 aaKnown RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 FAM161BQ96MY7 647 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 NUP88Q99567 741 aaPredicted RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 GPR20Q99678 358 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 RAVER2Q9HCJ3 691 aaKnown RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 PDLIM7Q9NR12 457 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 TOMM22Q9NS69 142 aa6.55□□□□□ -1.36
LINC01947-201ENST00000523742 ADD3Q9UEY8 706 aaKnown RBP6.55□□□□□ -1.36
LINC01947-201ENST00000523742 A0A0U1RQG5 324 aaPredicted RBP6.54□□□□□ -1.36
LINC01947-201ENST00000523742 ARVCFO00192 962 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 KIAA0355O15063 1070 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 RANBP6O60518 1105 aaKnown RBP6.54□□□□□ -1.36
LINC01947-201ENST00000523742 PLA2G6O60733 806 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 TIMP1P01033 207 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 FOSL2P15408 326 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 GALK1P51570 392 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 MFAP1P55081 439 aaKnown RBP6.54□□□□□ -1.36
LINC01947-201ENST00000523742 GJA9P57773 515 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 PPARAQ07869 468 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 PSRC1Q6PGN9 363 aaPredicted RBP6.54□□□□□ -1.36
LINC01947-201ENST00000523742 ANKRD33Q7Z3H0 272 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 C12orf40Q86WS4 652 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 TICAM2Q86XR7 235 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
LINC01947-201ENST00000523742 KLHDC9Q8NEP7 349 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 TPX2Q9ULW0 747 aaKnown RBP6.54□□□□□ -1.36
LINC01947-201ENST00000523742 ROBO3Q96MS0 1386 aa6.54□□□□□ -1.36
LINC01947-201ENST00000523742 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 MYH8P13535 1937 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 LOC102724159A0A0B4J2E5 919 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 IGKV6D-41A0A0C4DH26 115 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 TRIM43BA6NCK2 446 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 SNAI1O95863 264 aaPredicted RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CBX7O95931 251 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CHGBP05060 677 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 ASGR1P07306 291 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 ALAS1P13196 640 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 NPR3P17342 541 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 MX1P20591 662 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 MCCP23508 829 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CST5P28325 142 aaPredicted RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 NT5C2P49902 561 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 EPHB3P54753 998 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 TNFAIP2Q03169 654 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 RTP5Q14D33 572 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 PWP2Q15269 919 aaKnown RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CCDC96Q2M329 555 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CCDC144BQ3MJ40 725 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 C9orf50Q5SZB4 431 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 ANKRD45Q5TZF3 282 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 IQSEC1Q6DN90 963 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 RCSD1Q6JBY9 416 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 MFSD5Q6N075 450 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 ARMCX2Q7L311 632 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CCDC144CPQ8IYA2 1237 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 DCAF4Q8WV16 495 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 TRIM43Q96BQ3 446 aaPredicted RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 EVI5LQ96CN4 794 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 CDX2Q99626 313 aaPredicted RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 HELLSQ9NRZ9 838 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 HOMER2Q9NSB8 354 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 RNF146Q9NTX7 359 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 MSRAQ9UJ68 235 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 YBX2Q9Y2T7 364 aaKnown RBP6.53□□□□□ -1.36
LINC01947-201ENST00000523742 RIPK3Q9Y572 518 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 ZNF236Q9UL36 1845 aa6.53□□□□□ -1.36
LINC01947-201ENST00000523742 ALPK3Q96L96 1907 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 TTC28Q96AY4 2481 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 SMIM22K7EJ46 135 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 M0R2C6 588 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 SUPT20HL2P0C7V6 817 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 PCP11498 1178 aaKnown RBP6.52□□□□□ -1.37
LINC01947-201ENST00000523742 TNK2Q07912 1038 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 CCDC178Q5BJE1 867 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 ZBTB37Q5TC79 503 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 C20orf194Q5TEA3 1177 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 TSHZ3Q63HK5 1081 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 NSMFQ6X4W1 530 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 MAFAQ8NHW3 353 aaPredicted RBP6.52□□□□□ -1.37
LINC01947-201ENST00000523742 GUCD1Q96NT3 240 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms