RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	CFAP100	Q494V2	611 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	ODR4	Q5SWX8	454 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	UNQ6494/PRO21346	Q6UXR6	183 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	SGMS1	Q86VZ5	419 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	D2HGDH	Q8N465	521 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	GPHA2	Q96T91	129 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	MRI	Q9BWK5	157 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	CABP5	Q9NP86	173 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	HOMER2	Q9NSB8	354 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	DENND2A	Q9ULE3	1009 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	SH3BP1	Q9Y3L3	701 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	IQGAP2	Q13576	1575 aa		6.18	□□□□□ -1.42
SREK1-213	ENST00000523655	LCHN	A4D1U4	455 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	ZNF891	A8MT65	544 aa	Predicted RBP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655		B4E1Z4	1266 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	KPNA6	O60684	536 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	APOL3	O95236	402 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	HNRNPL	P14866	589 aa	Known RBP eCLIP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	ATP2A2	P16615	1042 aa	Known RBP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	POU3F3	P20264	500 aa	Predicted RBP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	FNTB	P49356	437 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	ROM1	Q03395	351 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	MIIP	Q5JXC2	388 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	TTC38	Q5R3I4	469 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	GORAB	Q5T7V8	394 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	ANKRD53	Q8N9V6	530 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	PRPF38A	Q8NAV1	312 aa	Known RBP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	RTF1	Q92541	710 aa	Known RBP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	PCED1A	Q9H1Q7	454 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	ACSS2	Q9NR19	701 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	OXSM	Q9NWU1	459 aa		6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.17	□□□□□ -1.42
SREK1-213	ENST00000523655	HMGA2	P52926	109 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	BPIFB4	P59827	614 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	ADAM8	P78325	824 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	MAP3K12	Q12852	859 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	ZNF174	Q15697	407 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	KLHDC10	Q6PID8	442 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	EXOC8	Q8IYI6	725 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	NKD2	Q969F2	451 aa	Predicted RBP	6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	FAM89A	Q96GI7	184 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	PLEKHG4B	Q96PX9	1271 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	CEP89	Q96ST8	783 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	MYL10	Q9BUA6	226 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	MS4A5	Q9H3V2	200 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	TOMM22	Q9NS69	142 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	GABBR1	Q9UBS5	961 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	ATP8A1	Q9Y2Q0	1164 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	THRAP3	Q9Y2W1	955 aa	Known RBP	6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	JCAD	Q9P266	1359 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	NPAT	Q14207	1427 aa		6.16	□□□□□ -1.42
SREK1-213	ENST00000523655	ATP10B	O94823	1461 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655		A0A1W2PRX2	142 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	CAPN14	A8MX76	684 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	PEX14	O75381	377 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	CDKN1C	P49918	316 aa	Predicted RBP	6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	TBX4	P57082	545 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	EXOSC10	Q01780	885 aa	Known RBP	6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	PTH1R	Q03431	593 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	TCIRG1	Q13488	830 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	DGKD	Q16760	1214 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	LSM12	Q3MHD2	195 aa	Known RBP	6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	CNNM4	Q6P4Q7	775 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	UBE2R2	Q712K3	238 aa	Predicted RBP	6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	GAREM2	Q75VX8	874 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	ADGRE4P	Q86SQ3	457 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	MTFR1L	Q9H019	292 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	POFUT1	Q9H488	388 aa		6.15	□□□□□ -1.42
SREK1-213	ENST00000523655	ZMYM3	Q14202	1370 aa		6.15	□□□□□ -1.43
SREK1-213	ENST00000523655	ABCA8	O94911	1581 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	VWDE	Q8N2E2	1590 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	LRP5	O75197	1615 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	UBE2QL1	A1L167	161 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	CYR61	O00622	381 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	NARS	O43776	548 aa	Known RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	MAF	O75444	373 aa	Predicted RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	ACRV1	P26436	265 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	NEK4	P51957	841 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	RBM6	P78332	1123 aa	Known RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	BRDT	Q58F21	947 aa	Predicted RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	FNDC7	Q5VTL7	733 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655		Q6ZRM9	215 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	THNSL2	Q86YJ6	484 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	CCAR1	Q8IX12	1150 aa	Known RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	CCDC146	Q8IYE0	955 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	MORC4	Q8TE76	937 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	CHTF18	Q8WVB6	975 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	RABGGTA	Q92696	567 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	GCDH	Q92947	438 aa	Predicted RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	NINJ1	Q92982	152 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	MFSD3	Q96ES6	412 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	DYDC2	Q96IM9	177 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	C8orf48	Q96LL4	319 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	FAM126A	Q9BYI3	521 aa	Predicted RBP	6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	NELFA	Q9H3P2	528 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	ZMAT4	Q9H898	229 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	EID1	Q9Y6B2	187 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	CARMIL1	Q5VZK9	1371 aa		6.14	□□□□□ -1.43
SREK1-213	ENST00000523655	RGS12	O14924	1447 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms