RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 B4GALT5O43286 388 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 RPS6KA5O75582 802 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 TIMP1P01033 207 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 STRN3Q13033 797 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 FAM187BQ17R55 369 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 BMT2Q1RMZ1 405 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 COBLL1Q53SF7 1204 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 ADSSL1Q8N142 457 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 GUF1Q8N442 669 aaKnown RBP17.87■□□□□ 0.45
LSM1-204ENST00000522515 ACCSQ96QU6 501 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 FUCA2Q9BTY2 467 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 PRMT7Q9NVM4 692 aaPredicted RBP17.87■□□□□ 0.45
LSM1-204ENST00000522515 SQORQ9Y6N5 450 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 TANC1Q9C0D5 1861 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 ACKR2O00590 384 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 EVI5O60447 810 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 NBNO60934 754 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 RAG1P15918 1043 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 SFPQP23246 707 aaKnown RBP eCLIP17.87■□□□□ 0.45
LSM1-204ENST00000522515 CD52P31358 61 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 ABCD1P33897 745 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 TYRO3Q06418 890 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 CATSPER4Q7RTX7 472 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 PADI3Q9ULW8 664 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 ST3GAL5Q9UNP4 418 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 ZMYM2Q9UBW7 1377 aa17.87■□□□□ 0.45
LSM1-204ENST00000522515 UBE4BO95155 1302 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 TSPAN1O60635 241 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 ERLIN2O94905 339 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 NFX1Q12986 1120 aaKnown RBP17.86■□□□□ 0.45
LSM1-204ENST00000522515 PRPF4BQ13523 1007 aaKnown RBP17.86■□□□□ 0.45
LSM1-204ENST00000522515 STX1AQ16623 288 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 KNOP1Q1ED39 458 aaKnown RBP17.86■□□□□ 0.45
LSM1-204ENST00000522515 TSHZ1Q6ZSZ6 1077 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 USP38Q8NB14 1042 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 MLKLQ8NB16 471 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 PRIMPOLQ96LW4 560 aa17.86■□□□□ 0.45
LSM1-204ENST00000522515 TARS2Q9BW92 718 aaKnown RBP17.86■□□□□ 0.45
LSM1-204ENST00000522515 KIF20AO95235 890 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 PCBP1Q15365 356 aaKnown RBP eCLIP17.85■□□□□ 0.45
LSM1-204ENST00000522515 SYCP3Q8IZU3 236 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 DPF3Q92784 378 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 CPB2Q96IY4 423 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 MRPL4Q9BYD3 311 aaKnown RBP17.85■□□□□ 0.45
LSM1-204ENST00000522515 KCTD10Q9H3F6 313 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 TMEM206Q9H813 350 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 ERVK-5Q9HDB9 667 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 ANO10Q9NW15 660 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 PRKAG2Q9UGJ0 569 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 SCN5AQ14524 2016 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 CNTNAP2Q9UHC6 1331 aa17.85■□□□□ 0.45
LSM1-204ENST00000522515 TISP43B9A030 160 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 ANKRD63C9JTQ0 380 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 HNRNPDLO14979 420 aaKnown RBP17.84■□□□□ 0.45
LSM1-204ENST00000522515 GPR182O15218 404 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 TGFB1I1O43294 461 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 CCDC192P0DO97 292 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 ARF4P18085 180 aaPredicted RBP17.84■□□□□ 0.45
LSM1-204ENST00000522515 HOXA11P31270 313 aaPredicted RBP17.84■□□□□ 0.45
LSM1-204ENST00000522515 PAK2Q13177 524 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 STIM1Q13586 685 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 KLHL10Q6JEL2 608 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 SLC39A4Q6P5W5 647 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 CDR2LQ86X02 465 aaPredicted RBP17.84■□□□□ 0.45
LSM1-204ENST00000522515 BICD1Q96G01 975 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 ACO2Q99798 780 aaKnown RBP17.84■□□□□ 0.45
LSM1-204ENST00000522515 IFIH1Q9BYX4 1025 aaKnown RBP17.84■□□□□ 0.45
LSM1-204ENST00000522515 SEMA6BQ9H3T3 888 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 AGPAT5Q9NUQ2 364 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 EXOC7Q9UPT5 735 aa17.84■□□□□ 0.45
LSM1-204ENST00000522515 PARNO95453 639 aaKnown RBP17.83■□□□□ 0.45
LSM1-204ENST00000522515 PIGRP01833 764 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 SYN1P17600 705 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 PPP1R2P41236 205 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 LIG4P49917 911 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 ATF7IP2Q5U623 682 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 MFSD5Q6N075 450 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 ZPBP2Q6X784 338 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 C11orf57Q6ZUT1 292 aaPredicted RBP17.83■□□□□ 0.45
LSM1-204ENST00000522515 DHTKD1Q96HY7 919 aaPredicted RBP17.83■□□□□ 0.45
LSM1-204ENST00000522515 ZBTB45Q96K62 511 aaPredicted RBP17.83■□□□□ 0.45
LSM1-204ENST00000522515 GBP3Q9H0R5 595 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 DNAJC25Q9H1X3 360 aa17.83■□□□□ 0.45
LSM1-204ENST00000522515 PIN4Q9Y237 131 aaKnown RBP17.83■□□□□ 0.45
LSM1-204ENST00000522515 PSMA7O14818 248 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 CXCL10P02778 98 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 CSF2RAP15509 400 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 PMS1P54277 932 aaKnown RBP17.83■□□□□ 0.44
LSM1-204ENST00000522515 TMEM132AQ24JP5 1023 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 ANO6Q4KMQ2 910 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 PLEKHG4Q58EX7 1191 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 CENPPQ6IPU0 288 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 DEFB128Q7Z7B8 93 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 DBF4BQ8NFT6 615 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 VWCEQ96DN2 955 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 TMX1Q9H3N1 280 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 ZMYND8Q9ULU4 1186 aaPredicted RBP17.83■□□□□ 0.44
LSM1-204ENST00000522515 CTNND2Q9UQB3 1225 aa17.83■□□□□ 0.44
LSM1-204ENST00000522515 A0A1B0GUA9 196 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms