RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 PLCB4Q15147 1175 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 CEP55Q53EZ4 464 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 FBXO47Q5MNV8 452 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 TAF2Q6P1X5 1199 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 CENPQQ7L2Z9 268 aaPredicted RBP9.13□□□□□ -0.95
PVT1-213ENST00000522414 FIBCD1Q8N539 461 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.13□□□□□ -0.95
PVT1-213ENST00000522414 APBB2Q92870 758 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 MRPL38Q96DV4 380 aaKnown RBP9.13□□□□□ -0.95
PVT1-213ENST00000522414 UBE2ZQ9H832 354 aaPredicted RBP9.13□□□□□ -0.95
PVT1-213ENST00000522414 RBM28Q9NW13 759 aaKnown RBP9.13□□□□□ -0.95
PVT1-213ENST00000522414 BARHL2Q9NY43 387 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 MICAL3Q7RTP6 2002 aa9.13□□□□□ -0.95
PVT1-213ENST00000522414 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
PVT1-213ENST00000522414 RRN3P2A6NIE6 340 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 GOLGA8AA7E2F4 631 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 GOLGA8BA8MQT2 603 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 FAM86B1E9PN63 330 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 H3BQ06 376 aaPredicted RBP9.12□□□□□ -0.95
PVT1-213ENST00000522414 GRM6O15303 877 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 CSPG5O95196 566 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 ATG7O95352 703 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 FOSP01100 380 aaPredicted RBP9.12□□□□□ -0.95
PVT1-213ENST00000522414 FAM86B2P0C5J1 330 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 IBSPP21815 317 aaPredicted RBP9.12□□□□□ -0.95
PVT1-213ENST00000522414 BMPR1AP36894 532 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 ADCY7P51828 1080 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 MRPS6P82932 125 aaKnown RBP9.12□□□□□ -0.95
PVT1-213ENST00000522414 FGD1P98174 961 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 SPEM2Q0P670 501 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 TCEAL5Q5H9L2 206 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 SH3PXD2AQ5TCZ1 1133 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 SHISA2Q6UWI4 295 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 Q6ZUG5 572 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 PLPPR4Q7Z2D5 763 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 TRMT1LQ7Z2T5 733 aaKnown RBP9.12□□□□□ -0.95
PVT1-213ENST00000522414 RSPH3Q86UC2 560 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 SDF4Q9BRK5 362 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 ANO3Q9BYT9 981 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 AZI2Q9H6S1 392 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 PADI3Q9ULW8 664 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 PCDHA2Q9Y5H9 948 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 SIP14410 1827 aa9.12□□□□□ -0.95
PVT1-213ENST00000522414 NFASCO94856 1347 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 KRTAP4-8A0A0G2JLE6 195 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 C9orf172C9J069 976 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 DHX15O43143 795 aaKnown RBP9.11□□□□□ -0.95
PVT1-213ENST00000522414 CDC45O75419 566 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 DGKIO75912 1065 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 LINC00271P0C7V0 271 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 KLRC1P26715 233 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 NOS2P35228 1153 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 SREBF1P36956 1147 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 GATMP50440 423 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 EPHA4P54764 986 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 TEAD4Q15561 434 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 PTPROQ16827 1216 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 TMEM266Q2M3C6 531 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 IER5Q5VY09 327 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 SWSAP1Q6NVH7 229 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 MTHFD1LQ6UB35 978 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 ABHD15Q6UXT9 468 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 PLA2G4DQ86XP0 818 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 LINC01599Q8WXQ3 324 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 PHKBQ93100 1093 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 JAKMIP1Q96N16 626 aaKnown RBP9.11□□□□□ -0.95
PVT1-213ENST00000522414 SAMD11Q96NU1 681 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 TMX1Q9H3N1 280 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 ALG13Q9NP73 1137 aaKnown RBP9.11□□□□□ -0.95
PVT1-213ENST00000522414 GINS2Q9Y248 185 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 SNX14Q9Y5W7 946 aa9.11□□□□□ -0.95
PVT1-213ENST00000522414 IGLV3-22A0A075B6J6 115 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 IGKV6D-21A0A0A0MT36 114 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 BACH1O14867 736 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 IL9P15248 144 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 CTNNB1P35222 781 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 GTF2F1P35269 517 aaKnown RBP eCLIP9.1□□□□□ -0.95
PVT1-213ENST00000522414 METAP2P50579 478 aaKnown RBP eCLIP9.1□□□□□ -0.95
PVT1-213ENST00000522414 CCT2P78371 535 aaKnown RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 DLX2Q07687 328 aaPredicted RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 BTG3Q14201 252 aaPredicted RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 KRT32Q14532 448 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 PKN1Q16512 942 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 PFKFB3Q16875 520 aaPredicted RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 LEXMQ3ZCV2 418 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 TSHZ1Q6ZSZ6 1077 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 CCDC60Q8IWA6 550 aaPredicted RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 FAM178BQ8IXR5 827 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 KIAA0319LQ8IZA0 1049 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
PVT1-213ENST00000522414 RASGRP4Q8TDF6 673 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 CRYGNQ8WXF5 182 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 KCNB2Q92953 911 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 BRF1Q92994 677 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 ZNF689Q96CS4 500 aaPredicted RBP9.1□□□□□ -0.95
PVT1-213ENST00000522414 LRFN3Q9BTN0 628 aa9.1□□□□□ -0.95
PVT1-213ENST00000522414 C1QTNF1Q9BXJ1 281 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms