RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MMP10P09238 476 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 TRIM49P0CI25 452 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 TRIM49CP0CI26 452 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 SOX5P35711 763 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 HDLBPQ00341 1268 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 SPATA20Q8TB22 786 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 MORC4Q8TE76 937 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 NUP85Q9BW27 656 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 GOLGA8QA0A0J9YX86 632 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 GOLGA8OA6NCC3 632 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 GOLGA8NF8WBI6 632 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 TOM1L1O75674 476 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 PLEKP08567 350 aaPredicted RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 QARSP47897 775 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ARL4CP56559 192 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 MEA1Q16626 185 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 SUPT20HL1Q3ZLR7 823 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ZNF394Q53GI3 561 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 EEPD1Q7L9B9 569 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 PARP9Q8IXQ6 854 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ARHGEF1Q92888 912 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 DCPSQ96C86 337 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 CCT8L2Q96SF2 557 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 C11orf70Q9BRQ4 267 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ISCUQ9H1K1 167 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ZWILCHQ9H900 591 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 NOP53Q9NZM5 478 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ABCC6O95255 1503 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 KRT37O76014 449 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 SMARCA1P28370 1054 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 FBXO33Q7Z6M2 555 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 USP38Q8NB14 1042 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 NLRP7Q8WX94 980 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 EIF2AK1Q9BQI3 630 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 HSD3B7Q9H2F3 369 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 SNX25Q9H3E2 840 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 RPF1Q9H9Y2 349 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 KLC4Q9NSK0 619 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 TMEM51Q9NW97 253 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 CAPN6Q9Y6Q1 641 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 RAD51CO43502 376 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 SMIM24O75264 130 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 KRT76Q01546 638 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 PTGISQ16647 500 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 KRT39Q6A163 491 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 ADGRA1Q86SQ6 560 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 TTC13Q8NBP0 860 aa14.75□□□□□ -0.05
SYNPO-205ENST00000522122 AENQ8WTP8 325 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
SYNPO-205ENST00000522122 A0A0U1RQJ8 604 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 BRAFP15056 766 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 CCDC137Q6PK04 289 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 RPAINQ86UA6 219 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 LACRTQ9GZZ8 138 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 WNT8AQ9H1J5 351 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 NGRNQ9NPE2 291 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 TLK1Q9UKI8 766 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 DENND3A2RUS2 1198 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 CARSP49589 748 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 MYO1EQ12965 1108 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 RBBP5Q15291 538 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 N4BP2L2Q92802 583 aaPredicted RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 CLDN3O15551 220 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 EYA4O95677 639 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 SRGAP2BP0DMP2 458 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 PMS1P54277 932 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 ATG16L1Q676U5 607 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 THNSL1Q8IYQ7 743 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 THOC1Q96FV9 657 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 CHMP6Q96FZ7 201 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 RNPC3Q96LT9 517 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 RPS6KC1Q96S38 1066 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 TRIM55Q9BYV6 548 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 IPO11Q9UI26 975 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 DUSP10Q9Y6W6 482 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 DHX34Q14147 1143 aaKnown RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 ZNF662Q6ZS27 426 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 EPM2AIP1Q7L775 607 aaPredicted RBP14.74□□□□□ -0.05
SYNPO-205ENST00000522122 FAM213AQ9BRX8 229 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 ATP6V0A4Q9HBG4 840 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 MTMR4Q9NYA4 1195 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 MST1RQ04912 1400 aa14.74□□□□□ -0.05
SYNPO-205ENST00000522122 RGPD8O14715 1765 aaPredicted RBP14.73□□□□□ -0.05
SYNPO-205ENST00000522122 CCNA1P78396 465 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 NID2Q14112 1375 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 HSP90AA5PQ58FG0 334 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 RNF25Q96BH1 459 aaPredicted RBP14.73□□□□□ -0.05
SYNPO-205ENST00000522122 HDAC11Q96DB2 347 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 CFAP36Q96G28 342 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 TTC25Q96NG3 672 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 LXNQ9BS40 222 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 LRRC4Q9HBW1 653 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 TPX2Q9ULW0 747 aaKnown RBP14.73□□□□□ -0.05
SYNPO-205ENST00000522122 FAM205AQ6ZU69 1335 aa14.73□□□□□ -0.05
SYNPO-205ENST00000522122 EMSYQ7Z589 1322 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms