RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SMG8Q8ND04 991 aaKnown RBP19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 RSPH1Q8WYR4 309 aa19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 CCDC51Q96ER9 411 aa19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 CSRNP2Q9H175 543 aa19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 TBC1D13Q9NVG8 400 aa19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 INPP5FQ9Y2H2 1132 aa19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 PCDHGC5Q9Y5F6 944 aa19.8■□□□□ 0.76
TRAPPC9-211ENST00000521700 NCK2O43639 380 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 NCLP19338 710 aaKnown RBP19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 SYT1P21579 422 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 BCAR1P56945 870 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 CTC1Q2NKJ3 1217 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 LEXMQ3ZCV2 418 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 CDCA2Q69YH5 1023 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 ADGRD2Q7Z7M1 963 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 CNNM3Q8NE01 707 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 MICAL1Q8TDZ2 1067 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 MRPS27Q92552 414 aaKnown RBP19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 PNMA5Q96PV4 448 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 FZD8Q9H461 694 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 IGFLR1Q9H665 355 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 TLR9Q9NR96 1032 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 FOXD4L1Q9NU39 408 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 CLDND1Q9NY35 253 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 SPG21Q9NZD8 308 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 LZTS1Q9Y250 596 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 IPPQ9Y573 584 aa19.79■□□□□ 0.76
TRAPPC9-211ENST00000521700 TTC28Q96AY4 2481 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 A0A1B0GUA9 196 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 NT5C1B-RDH14C9J2C7 533 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 PPM1AP35813 382 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 LTBRP36941 435 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 NAMPTP43490 491 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 AFF1P51825 1210 aaKnown RBP19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 ZRSR1Q15695 479 aaKnown RBP19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 HYIQ5T013 277 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 PPP4R3CPQ6ZMV5 832 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 EP400NLQ6ZTU2 488 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 CDR2LQ86X02 465 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 ZBTB8OSQ8IWT0 167 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 SLC39A11Q8N1S5 342 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 SNX21Q969T3 373 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 RNF39Q9H2S5 420 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 NRDE2Q9H7Z3 1164 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 RSAD1Q9HA92 442 aa19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 PRMT7Q9NVM4 692 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 PUF60Q9UHX1 559 aaKnown RBP19.78■□□□□ 0.76
TRAPPC9-211ENST00000521700 CNTNAP2Q9UHC6 1331 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 H3BQ06 376 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 FSCN2O14926 492 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 ITGA4P13612 1032 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 ALDH7A1P49419 539 aaKnown RBP19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 KRT17Q04695 432 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 SF3A1Q15459 793 aaKnown RBP19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 FAM187BQ17R55 369 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 RBM23Q86U06 439 aaKnown RBP19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 ZNF280BQ86YH2 543 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 KIFAP3Q92845 792 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 PRIMPOLQ96LW4 560 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 NECAB3Q96P71 396 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 UHRF1Q96T88 793 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 PLIN2Q99541 437 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 C2orf40Q9H1Z8 148 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 HES2Q9Y543 173 aa19.77■□□□□ 0.76
TRAPPC9-211ENST00000521700 TTLL13PA6NNM8 815 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 LINC01565O15544 149 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 B4GALT3O60512 393 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 ZC3H11AO75152 810 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 BMP15O95972 392 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 GALTP07902 379 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 RNASELQ05823 741 aaKnown RBP19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 DLX2Q07687 328 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 RESTQ13127 1097 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 ADAM15Q13444 863 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 PPP2R5AQ15172 486 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 RINT1Q6NUQ1 792 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 C1orf186Q6ZWK4 172 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 DAW1Q8N136 415 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 DEPTORQ8TB45 409 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 URGCPQ8TCY9 931 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 PPP2R3CQ969Q6 453 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 IFT74Q96LB3 600 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 AK8Q96MA6 479 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 KIFC3Q9BVG8 833 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 RUSC1Q9BVN2 902 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 CCDC113Q9H0I3 377 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 UBN1Q9NPG3 1134 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 DNAJB4Q9UDY4 337 aa19.76■□□□□ 0.75
TRAPPC9-211ENST00000521700 ACKR2O00590 384 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 DDHD2O94830 711 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 NPTXRO95502 500 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 NRIP1P48552 1158 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 GRIN1Q05586 938 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 MAPK6Q16659 721 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 PDE12Q6L8Q7 609 aaKnown RBP19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 FAM173BQ6P4H8 233 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 SLC27A1Q6PCB7 646 aa19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 TMEM173Q86WV6 379 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC9-211ENST00000521700 KCTD17Q8N5Z5 321 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms