RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DUSP8Q13202 625 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 RIN1Q13671 783 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 NRN1LQ496H8 165 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 GAGE13Q4V321 117 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 CNNM4Q6P4Q7 775 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 SGMS1Q86VZ5 419 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 BCL6BQ8N143 479 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-209ENST00000521559 THEMISQ8N1K5 641 aaPredicted RBP4.48□□□□□ -1.69
VPS13B-209ENST00000521559 D2HGDHQ8N465 521 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 DYDC2Q96IM9 177 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 WDR92Q96MX6 357 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 PCGF6Q9BYE7 350 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS13B-209ENST00000521559 USP36Q9P275 1121 aaKnown RBP4.48□□□□□ -1.69
VPS13B-209ENST00000521559 RAB3GAP2Q9H2M9 1393 aa4.48□□□□□ -1.69
VPS13B-209ENST00000521559 PRPF6O94906 941 aaKnown RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 AMHP03971 560 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ATP2A2P16615 1042 aaKnown RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 HIBADHP31937 336 aaKnown RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ADCY7P51828 1080 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 KPNA1P52294 538 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ATP2C1P98194 919 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 FOXL1Q12952 345 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 LRRC32Q14392 662 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 USP39Q53GS9 565 aaKnown RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 KIAA1841Q6NSI8 718 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 CRIP3Q6Q6R5 217 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 Q6ZSN1 163 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 NOP9Q86U38 636 aaKnown RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 C11orf74Q86VG3 221 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 GPR135Q8IZ08 494 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ANKRD35Q8N283 1001 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 OR2W6PQ8NHA6 318 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 MFSD3Q96ES6 412 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 HIST1H2AHQ96KK5 128 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 HIST1H2AJQ99878 128 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ZNF747Q9BV97 191 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ZNF341Q9BYN7 854 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
VPS13B-209ENST00000521559 RBM8AQ9Y5S9 174 aaKnown RBP4.47□□□□□ -1.69
VPS13B-209ENST00000521559 ST20-MTHFSA0A0A6YYL1 179 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 CYR61O00622 381 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 FSBPO95073 299 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 APOL3O95236 402 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 FSHBP01225 129 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 JUNP05412 331 aaKnown RBP4.46□□□□□ -1.7
VPS13B-209ENST00000521559 ACRV1P26436 265 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 BPIFB4P59827 614 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 DSG1Q02413 1049 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 FOXE3Q13461 319 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 TCIRG1Q13488 830 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 C21orf62-AS1Q17RA5 79 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 GPR158Q5T848 1215 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 KRT40Q6A162 431 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 RNF207Q6ZRF8 634 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 KANSL1Q7Z3B3 1105 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 NXPE1Q8N323 547 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 PLA2G15Q8NCC3 412 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 NKD2Q969F2 451 aaPredicted RBP4.46□□□□□ -1.7
VPS13B-209ENST00000521559 OSBPL6Q9BZF3 934 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 PITHD1Q9GZP4 211 aaPredicted RBP4.46□□□□□ -1.7
VPS13B-209ENST00000521559 C14orf93Q9H972 538 aaKnown RBP4.46□□□□□ -1.7
VPS13B-209ENST00000521559 TLR9Q9NR96 1032 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 THG1LQ9NWX6 298 aaKnown RBP4.46□□□□□ -1.7
VPS13B-209ENST00000521559 KCNG1Q9UIX4 513 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 MAGEL2Q9UJ55 1249 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 GIT1Q9Y2X7 761 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 MRPL42Q9Y6G3 142 aaKnown RBP4.46□□□□□ -1.7
VPS13B-209ENST00000521559 KDM5DQ9BY66 1539 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 ARHGAP31Q2M1Z3 1444 aa4.46□□□□□ -1.7
VPS13B-209ENST00000521559 CROCC2H7BZ55 1655 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 ADGBQ8N7X0 1667 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 PTPRMP28827 1452 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 A0A0A6YYJ9 748 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 VSIG10L2P0DP72 767 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 LSP1P33241 339 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 ANTXR2P58335 489 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 TKFCQ3LXA3 575 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 CREB3L3Q68CJ9 461 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 ESRP1Q6NXG1 681 aaKnown RBP4.45□□□□□ -1.7
VPS13B-209ENST00000521559 CLEC14AQ86T13 490 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 C1orf210Q8IVY1 113 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 DHX37Q8IY37 1157 aaKnown RBP4.45□□□□□ -1.7
VPS13B-209ENST00000521559 ZNF808Q8N4W9 903 aaPredicted RBP4.45□□□□□ -1.7
VPS13B-209ENST00000521559 ANKRD53Q8N9V6 530 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 SLC16A11Q8NCK7 471 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 CHTF18Q8WVB6 975 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 RTF1Q92541 710 aaKnown RBP4.45□□□□□ -1.7
VPS13B-209ENST00000521559 FERMT2Q96AC1 680 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 TMEM176AQ96HP8 235 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 RPL10LQ96L21 214 aaKnown RBP4.45□□□□□ -1.7
VPS13B-209ENST00000521559 UIMC1Q96RL1 719 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 NOL10Q9BSC4 688 aaKnown RBP4.45□□□□□ -1.7
VPS13B-209ENST00000521559 MYL10Q9BUA6 226 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 HAPLN2Q9GZV7 340 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 MTFR1LQ9H019 292 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 MTG2Q9H4K7 406 aa4.45□□□□□ -1.7
VPS13B-209ENST00000521559 RCAN3Q9UKA8 241 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms