RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 IDEP14735 1019 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 NDUFA8P51970 172 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 NCKAP1LP55160 1127 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 ASIC1P78348 528 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 FAM160A1Q05DH4 1040 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 STRN3Q13033 797 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
HDAC2-211ENST00000521233 ALCAMQ13740 583 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 TMEM132AQ24JP5 1023 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 KANK3Q6NY19 840 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 CLEC17AQ6ZS10 378 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 ADGRA3Q8IWK6 1321 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 FAM178BQ8IXR5 827 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 KIFC3Q9BVG8 833 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 FZD8Q9H461 694 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 ELAC1Q9H777 363 aaKnown RBP13.77□□□□□ -0.21
HDAC2-211ENST00000521233 OLFML3Q9NRN5 406 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 TMEM161AQ9NX61 479 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 MSRAQ9UJ68 235 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 LRFN2Q9ULH4 789 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 PCDHA11Q9Y5I1 949 aa13.77□□□□□ -0.21
HDAC2-211ENST00000521233 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 C9IYK1 514 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 N4BP3O15049 544 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 SLC16A4O15374 487 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 TRAK2O60296 914 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 GJB5O95377 273 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 AMHR2Q16671 573 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 SLC27A1Q6PCB7 646 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■□□□ 11.9
HDAC2-211ENST00000521233 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 TMEM161BQ8NDZ6 487 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 CNNM3Q8NE01 707 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 C7orf25Q9BPX7 421 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 ADPGKQ9BRR6 497 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 MRPL4Q9BYD3 311 aaKnown RBP13.76□□□□□ -0.21
HDAC2-211ENST00000521233 GOLPH3LQ9H4A5 285 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 POLD4Q9HCU8 107 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 SERTAD1Q9UHV2 236 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 TTC3P53804 2025 aa13.76□□□□□ -0.21
HDAC2-211ENST00000521233 PTPRSQ13332 1948 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 A0A0U1RQF3 1178 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 GOLGA6L22H0YM25 854 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 TLL1O43897 1013 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 ARF4P18085 180 aaPredicted RBP13.75□□□□□ -0.21
HDAC2-211ENST00000521233 LIG1P18858 919 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 HOXA11P31270 313 aaPredicted RBP13.75□□□□□ -0.21
HDAC2-211ENST00000521233 UBE2HP62256 183 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 TPRNQ4KMQ1 711 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 HAUS6Q7Z4H7 955 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
HDAC2-211ENST00000521233 PGBD4Q96DM1 585 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 YME1L1Q96TA2 773 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 RAD9AQ99638 391 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 TRIM6Q9C030 488 aaPredicted RBP13.75□□□□□ -0.21
HDAC2-211ENST00000521233 ST6GALNAC4Q9H4F1 302 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 FAM105AQ9NUU6 356 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 PANK4Q9NVE7 773 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
HDAC2-211ENST00000521233 INSL6Q9Y581 213 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
HDAC2-211ENST00000521233 ZMYM2Q9UBW7 1377 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 A0A1B0GUA9 196 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 B4GALT5O43286 388 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 KINO60870 393 aaKnown RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 ZNF623O75123 536 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 ZNF202O95125 648 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 EOMESO95936 686 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 DNAJB2P25686 324 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 AFMP43652 599 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 FAM189BP81408 668 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 HTRA4P83105 476 aaPredicted RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 COASYQ13057 564 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 HERC4Q5GLZ8 1057 aaPredicted RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 FAM109BQ6ICB4 259 aaPredicted RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 GPR153Q6NV75 609 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 UNC13DQ70J99 1090 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 RTN4RL1Q86UN2 441 aaPredicted RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 ECHDC2Q86YB7 292 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 FMR1NBQ8N0W7 255 aaPredicted RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 STAMQ92783 540 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 PAGE5Q96GU1 130 aa13.74□□□□□ -0.21
HDAC2-211ENST00000521233 MRPL44Q9H9J2 332 aaKnown RBP13.74□□□□□ -0.21
HDAC2-211ENST00000521233 HNRNPDLO14979 420 aaKnown RBP13.73□□□□□ -0.21
HDAC2-211ENST00000521233 UPP2O95045 317 aa13.73□□□□□ -0.21
HDAC2-211ENST00000521233 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms