RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TBCKQ8TEA7 893 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
MRPS28-206ENST00000520946 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
MRPS28-206ENST00000520946 GJA10Q969M2 543 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 LENG9Q96B70 501 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
MRPS28-206ENST00000520946 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 FAM186AA6NE01 2351 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 MEIS3P2A8K0S8 358 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 NRP1O14786 923 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-206ENST00000520946 DDHD2O94830 711 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 SOD2P04179 222 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 NPR3P17342 541 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 GLUD2P49448 558 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 Q4G0T1 1027 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 HACE1Q8IYU2 909 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 RASEFQ8IZ41 740 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 PSPC1Q8WXF1 523 aaKnown RBP12.87□□□□□ -0.35
MRPS28-206ENST00000520946 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-206ENST00000520946 NXPE3Q969Y0 559 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 RPS6KC1Q96S38 1066 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 RNF26Q9BY78 433 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-206ENST00000520946 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-206ENST00000520946 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
MRPS28-206ENST00000520946 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
MRPS28-206ENST00000520946 CPLX1O14810 134 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 ADAMTS3O15072 1205 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 NARSO43776 548 aaKnown RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 GAS2O43903 313 aaKnown RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 PSMD10O75832 226 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 CPA1P15085 419 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 PSMA5P28066 241 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 CCT2P78371 535 aaKnown RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 AGMOQ6ZNB7 445 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 KIAA2013Q8IYS2 634 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 CMASQ8NFW8 434 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 RSAD2Q8WXG1 361 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 COLEC11Q9BWP8 271 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
MRPS28-206ENST00000520946 SIT1Q9Y3P8 196 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 R4GN57 208 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 CLUHO75153 1309 aa12.86□□□□□ -0.35
MRPS28-206ENST00000520946 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 TEX28O15482 410 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 SPATA31D3P0C874 917 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 SRFP11831 508 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 RFC5P40937 340 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 QARSP47897 775 aaKnown RBP12.85□□□□□ -0.35
MRPS28-206ENST00000520946 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 CPLX2Q6PUV4 134 aaKnown RBP12.85□□□□□ -0.35
MRPS28-206ENST00000520946 SPATA31D4Q6ZUB0 917 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
MRPS28-206ENST00000520946 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 GLYCTKQ8IVS8 523 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 SLC44A3Q8N4M1 653 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
MRPS28-206ENST00000520946 TMEM143Q96AN5 459 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 SHDQ96IW2 340 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 HERC2P3Q9BVR0 1158 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 APOL6Q9BWW8 343 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
MRPS28-206ENST00000520946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
MRPS28-206ENST00000520946 PCDHA4Q9UN74 947 aa12.85□□□□□ -0.35
MRPS28-206ENST00000520946 ASAP2O43150 1006 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 CDC45O75419 566 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 TDP2O95551 362 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 DCNP07585 359 aaKnown RBP12.84□□□□□ -0.35
MRPS28-206ENST00000520946 IFNAR1P17181 557 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 NCLP19338 710 aaKnown RBP12.84□□□□□ -0.35
MRPS28-206ENST00000520946 NPEPPSP55786 919 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 TFDP1Q14186 410 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 DCLRE1AQ6PJP8 1040 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 ANO5Q75V66 913 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
MRPS28-206ENST00000520946 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 RNF149Q8NC42 400 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 CCDC43Q96MW1 224 aaKnown RBP12.84□□□□□ -0.35
MRPS28-206ENST00000520946 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 IFT122Q9HBG6 1241 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
MRPS28-206ENST00000520946 EPS15L1Q9UBC2 864 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 PPME1Q9Y570 386 aa12.84□□□□□ -0.35
MRPS28-206ENST00000520946 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
MRPS28-206ENST00000520946 KRBA1A5PL33 1030 aa12.83□□□□□ -0.36
MRPS28-206ENST00000520946 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms