RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 KSR1Q8IVT5 923 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 GUF1Q8N442 669 aaKnown RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 GOLGA5Q8TBA6 731 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PPP1R13LQ8WUF5 828 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 TMEM40Q8WWA1 233 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 STAMQ92783 540 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 ZBTB10Q96DT7 871 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 NLRP4Q96MN2 994 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 SCLT1Q96NL6 688 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 LBHD1Q9BQE6 289 aaPredicted RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 IFIH1Q9BYX4 1025 aaKnown RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 BLZF1Q9H2G9 400 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 MTIF3Q9H2K0 278 aaKnown RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 ELAC1Q9H777 363 aaKnown RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 MRPL44Q9H9J2 332 aaKnown RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PTPRHQ9HD43 1115 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PRDM5Q9NQX1 630 aaPredicted RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 EXOC1Q9NV70 894 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PADI3Q9ULW8 664 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 TBX20Q9UMR3 447 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 ST3GAL5Q9UNP4 418 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 TNFSF13BQ9Y275 285 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 NOC2LQ9Y3T9 749 aaKnown RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PCDHA5Q9Y5H7 936 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 GTF3C5Q9Y5Q8 519 aaPredicted RBP7□□□□□ -1.29
IGHV4-55-201ENST00000520889 STYXL1Q9Y6J8 313 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 UMODL1Q5DID0 1318 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 ADGRA3Q8IWK6 1321 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 COL4A6Q14031 1691 aa7□□□□□ -1.29
IGHV4-55-201ENST00000520889 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 RALGAPA2Q2PPJ7 1873 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 A0A1W2PPC1 479 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 DENND3A2RUS2 1198 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 SFI1A8K8P3 1242 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 INO80B-WBP1J3KQ70 363 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 K7ENM7 598 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 N4BP3O15049 544 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 SLC16A4O15374 487 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 TSPAN1O60635 241 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 TOM1L1O75674 476 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 EOMESO95936 686 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PRKCBP05771 671 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 CTSHP09668 335 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PRR29P0C7W0 189 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PRKCSHP14314 528 aaPredicted RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 ZSCAN20P17040 1043 aaPredicted RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PROZP22891 400 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 ITGB8P26012 769 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 FAM189BP81408 668 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 TMEM62Q0P6H9 643 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 STK4Q13043 487 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PNOCQ13519 176 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PRPF4BQ13523 1007 aaKnown RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 MORC3Q14149 939 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 IKBKEQ14164 716 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 DSC3Q14574 896 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 NFKBIBQ15653 356 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 DCAF4L1Q3SXM0 396 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 RASIP1Q5U651 963 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 NOTUMQ6P988 496 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 TAS1R3Q7RTX0 852 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 CATSPER4Q7RTX7 472 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 FAM228AQ86W67 206 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 C12orf56Q8IXR9 622 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 GRAMD1CQ8IYS0 662 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 PHOSPHO2Q8TCD6 241 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 HERVK_113Q902F9 699 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 BADQ92934 168 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 VWCEQ96DN2 955 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 DHTKD1Q96HY7 919 aaPredicted RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 ACCSQ96QU6 501 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 TSPAN18Q96SJ8 248 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 GDF15Q99988 308 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 MRPL4Q9BYD3 311 aaKnown RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 TSPYL2Q9H2G4 693 aaPredicted RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 ZHX3Q9H4I2 956 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 MINDY3Q9H8M7 445 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 AGO3Q9H9G7 860 aaKnown RBP6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 CDHR5Q9HBB8 845 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 RGS18Q9NS28 235 aa6.99□□□□□ -1.29
IGHV4-55-201ENST00000520889 BRCA2P51587 3418 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 FNDC1Q4ZHG4 1894 aaPredicted RBP6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 TDRD15B5MCY1 1934 aaKnown RBP6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 PTPRSQ13332 1948 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 A0A0U1RQF3 1178 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 CARNS1A5YM72 827 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 C9IYK1 514 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 PDXKO00764 312 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 HOXA2O43364 376 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 GCNT3O95395 438 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 CAVIN2O95810 425 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 LDHAP00338 332 aaKnown RBP6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 FGBP02675 491 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 MCF2P10911 925 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 GHRP10912 638 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 CSF2RAP15509 400 aa6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 ARF4P18085 180 aaPredicted RBP6.98□□□□□ -1.29
IGHV4-55-201ENST00000520889 GARTP22102 1010 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms