RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RNF181Q9P0P0 153 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 ATP8A1Q9Y2Q0 1164 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 NOC2LQ9Y3T9 749 aaKnown RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 DAAM1Q9Y4D1 1078 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 TARSL2A2RTX5 802 aaKnown RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 C19orf81C9J6K1 198 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 EBAG9O00559 213 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 NDUFAB1O14561 156 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 ATMINO43313 823 aaPredicted RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 TLR2O60603 784 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 GUCY2CP25092 1073 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 CARSP49589 748 aaKnown RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 GPC5P78333 572 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 EMBQ6PCB8 327 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 KCTD17Q8N5Z5 321 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 FBXL13Q8NEE6 735 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 COL20A1Q9P218 1284 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 RASSF10A6NK89 507 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 LRRIQ3A6PVS8 624 aaPredicted RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 THAP12O43422 761 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 ZRANB2O95218 330 aaKnown RBP eCLIP10.95□□□□□ -0.66
MCF2-209ENST00000520602 TMEM191BP0C7N4 346 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 NEFHP12036 1026 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 NPTX2P47972 431 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 IREB2P48200 963 aaKnown RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 C7orf43Q8WVR3 580 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 EXOC4Q96A65 974 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 OSGEPQ9NPF4 335 aa10.95□□□□□ -0.66
MCF2-209ENST00000520602 NXF1Q9UBU9 619 aaKnown RBP10.95□□□□□ -0.66
MCF2-209ENST00000520602 SART1O43290 800 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 DGAT1O75907 488 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 ACTR2P61160 394 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 AMPD2Q01433 879 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 DHX9Q08211 1270 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 SPIRE1Q08AE8 756 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 C10orf67Q8IYJ2 551 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 HNRNPLLQ8WVV9 542 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 CNOT8Q9UFF9 292 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 TBX20Q9UMR3 447 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 FRMPD4Q14CM0 1322 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 ANKRD62A6NC57 917 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 CLDN3O15551 220 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 TBC1D12O60347 775 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 BUB1BO60566 1050 aaPredicted RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 NOL4O94818 638 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 GRM1Q13255 1194 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 SCARA5Q6ZMJ2 495 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 DDX42Q86XP3 938 aaKnown RBP eCLIP10.94□□□□□ -0.66
MCF2-209ENST00000520602 CREG2Q8IUH2 290 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 DHX37Q8IY37 1157 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 ARFGAP2Q8N6H7 521 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.66
MCF2-209ENST00000520602 THAP2Q9H0W7 228 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 GRID2IPA4D2P6 1211 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 F8VZ95 297 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 H3BQF6 201 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 OPLAHO14841 1288 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 HNRNPH3P31942 346 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 DLG4P78352 724 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 ITGB3BPQ13352 177 aaPredicted RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 SEZ6Q53EL9 994 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 GLE1Q53GS7 698 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 XKR3Q5GH77 459 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 KAZNQ674X7 775 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 TMEM270Q6UE05 265 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 GPD1LQ8N335 351 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 MTFR1LQ9H019 292 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 TOPORSQ9NS56 1045 aaPredicted RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 AGO2Q9UKV8 859 aaKnown RBP10.94□□□□□ -0.66
MCF2-209ENST00000520602 SNX24Q9Y343 169 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
MCF2-209ENST00000520602 ZSCAN5CA6NGD5 496 aaPredicted RBP10.93□□□□□ -0.66
MCF2-209ENST00000520602 GOLGA8KD6RF30 607 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 EDIL3O43854 480 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 COPB2P35606 906 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 SEPT7Q16181 437 aaKnown RBP10.93□□□□□ -0.66
MCF2-209ENST00000520602 TPCN2Q8NHX9 752 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 CAPS2Q9BXY5 557 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 GANQ9H2C0 597 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 ANKEF1Q9NU02 776 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 SALL4Q9UJQ4 1053 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 ANAPC7Q9UJX3 599 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 ATRNL1Q5VV63 1379 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 GGPS1O95749 300 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 ATF7P17544 494 aaPredicted RBP10.93□□□□□ -0.66
MCF2-209ENST00000520602 DR1Q01658 176 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 NNTQ13423 1086 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 RUFY4Q6ZNE9 571 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 BCAS4Q8TDM0 211 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
MCF2-209ENST00000520602 NUP85Q9BW27 656 aa10.93□□□□□ -0.66
MCF2-209ENST00000520602 PPANQ9NQ55 473 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms