RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TSEN34Q9BSV6 310 aaKnown RBP9.35□□□□□ -0.91
VAPB-206ENST00000520497 TMEM106CQ9BVX2 250 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 AGPAT3Q9NRZ7 376 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 DMAC2Q9NW81 257 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 HDAC6Q9UBN7 1215 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 LIMA1Q9UHB6 759 aaKnown RBP9.35□□□□□ -0.91
VAPB-206ENST00000520497 GTF2IRD1Q9UHL9 959 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 EXOC7Q9UPT5 735 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 TET1Q8NFU7 2136 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 TDRD15B5MCY1 1934 aaKnown RBP9.35□□□□□ -0.91
VAPB-206ENST00000520497 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
VAPB-206ENST00000520497 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 GRIN2DO15399 1336 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 C17orf102A2RUQ5 167 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 MOXD2PA6NHM9 499 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 KCNJ18B7U540 433 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 CABYRO75952 493 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 NR3C1P04150 777 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 EDN1P05305 212 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 GJB1P08034 283 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 TPM1P09493 284 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 TMOD1P28289 359 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 EFNA5P52803 228 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 PTENP60484 403 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 ADAM9Q13443 819 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 TFDP1Q14186 410 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 MYBPC2Q14324 1141 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 KCNJ12Q14500 433 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 HABP4Q5JVS0 413 aaKnown RBP9.34□□□□□ -0.91
VAPB-206ENST00000520497 SLC39A4Q6P5W5 647 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 HS2ST1Q7LGA3 356 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 FILIP1Q7Z7B0 1213 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 ZSCAN30Q86W11 494 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 RHPN2Q8IUC4 686 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 C7orf31Q8N865 590 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 SPC24Q8NBT2 197 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 RNF149Q8NC42 400 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 CCDC150Q8NCX0 1101 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 PPP1R13LQ8WUF5 828 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 EEF2KMTQ96G04 330 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 NAP1L5Q96NT1 182 aaPredicted RBP9.34□□□□□ -0.91
VAPB-206ENST00000520497 MAP7D2Q96T17 732 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 C2orf40Q9H1Z8 148 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 IFT122Q9HBG6 1241 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 INTS13Q9NVM9 706 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 IFNKQ9P0W0 207 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 AKT3Q9Y243 479 aa9.34□□□□□ -0.91
VAPB-206ENST00000520497 TISP43B9A030 160 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 ANKRD63C9JTQ0 380 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 H0YGN5 161 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 K7ERI5 159 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 CETN3O15182 167 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 CLIC2O15247 247 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 SLC16A3O15427 465 aaKnown RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 TREHO43280 583 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 GPR32O75388 356 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 GNA14O95837 355 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 VTNP04004 478 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 SRGAP2CP0DJJ0 459 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 GNAT1P11488 350 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 CYP2C9P11712 490 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 CCL5P13501 91 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 RPL13P26373 211 aaKnown RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 ADSSP30520 456 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 GPC3P51654 580 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 ACLYP53396 1101 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 COPB1P53618 953 aaKnown RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 ZNF200P98182 395 aaPredicted RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 MBTD1Q05BQ5 628 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 MIIPQ5JXC2 388 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 ZBTB8OSQ8IWT0 167 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 SYCP3Q8IZU3 236 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 NLRP4Q96MN2 994 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 MKNK1Q9BUB5 465 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 XPO4Q9C0E2 1151 aaKnown RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 FZD8Q9H461 694 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 MINDY3Q9H8M7 445 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 PHF24Q9UPV7 400 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 COLQQ9Y215 455 aaPredicted RBP9.33□□□□□ -0.92
VAPB-206ENST00000520497 STYXL1Q9Y6J8 313 aa9.33□□□□□ -0.92
VAPB-206ENST00000520497 A0A087WZ62 844 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 A0A1W2PQ45 241 aaPredicted RBP9.32□□□□□ -0.92
VAPB-206ENST00000520497 A0A1W2PQY0 241 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 HNRNPDLO14979 420 aaKnown RBP9.32□□□□□ -0.92
VAPB-206ENST00000520497 MAPK13O15264 365 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 AKAP3O75969 853 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 PRKCBP05771 671 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 IQCF3P0C7M6 154 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 GARTP22102 1010 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 PBX1P40424 430 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 PHKA2P46019 1235 aa9.32□□□□□ -0.92
VAPB-206ENST00000520497 CASP4P49662 377 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms