RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TAGLN3Q9UI15 199 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 PCDHA5Q9Y5H7 936 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 RPTORQ8N122 1335 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 A0A0G2JNJ9 132 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 TMEM127O75204 238 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 ENDOD1O94919 500 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 KNG1P01042 644 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 ATF2P15336 505 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 IGFBP6P24592 240 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 MC3RP41968 323 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 TM4SF4P48230 202 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 ANTXR2P58335 489 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 DSC2Q02487 901 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 ZNF605Q86T29 641 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 DAAM2Q86T65 1068 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 UNC5BQ8IZJ1 945 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 BCL6BQ8N143 479 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 KRT78Q8N1N4 520 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 LINC00482Q8N8I6 264 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 KYQ8NBH2 561 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 RIN2Q8WYP3 895 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 HOXB13Q92826 284 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 RGMAQ96B86 450 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 CDK5RAP3Q96JB5 506 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 TNIP3Q96KP6 325 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 WDR92Q96MX6 357 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 ARPC5LQ9BPX5 153 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 GORASP1Q9BQQ3 440 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 C11orf84Q9BUA3 381 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 NAA15Q9BXJ9 866 aaKnown RBP6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 NLRC4Q9NPP4 1024 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 Q9UFV3 132 aa6.66□□□□□ -1.34
HMGB1P46-201ENST00000520062 H0Y858 1186 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 ADAM23O75077 832 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 LY86O95711 162 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 LTA4HP09960 611 aaKnown RBP6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 CTSSP25774 331 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 SESN2P58004 480 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 GPSM2P81274 684 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 IL10RAQ13651 578 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 NOMO1Q15155 1222 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 C19orf54Q5BKX5 351 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 ZMYM1Q5SVZ6 1142 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 C10orf62Q5T681 223 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 RNF220Q5VTB9 566 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 OTOP2Q7RTS6 562 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 OR2I1PQ8NGU4 316 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 KLHDC4Q8TBB5 520 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 DPF2Q92785 391 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 NKD2Q969F2 451 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 MYD88Q99836 296 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 BHMT2Q9H2M3 363 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 CNTD2Q9H8S5 307 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 EPB41L4AQ9HCS5 686 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 MBD1Q9UIS9 605 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 POLHQ9Y253 713 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 VWA7Q9Y334 891 aa6.65□□□□□ -1.34
HMGB1P46-201ENST00000520062 A0A088AWK7 358 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 TEX51A0A1B0GUA7 166 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 FRS3O43559 492 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 CREB3O43889 395 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 PQBP1O60828 265 aaKnown RBP6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 FTLP02792 175 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 ALDH5A1P51649 535 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 CDR1P51861 262 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 MAP2K6P52564 334 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 CDC42EP1Q00587 391 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 CD69Q07108 199 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 DHX8Q14562 1220 aaKnown RBP6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 RTP5Q14D33 572 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 CNN3Q15417 329 aaKnown RBP6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 MAEAQ7L5Y9 396 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 FAM129CQ86XR2 697 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 MZB1Q8WU39 189 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 LRTOMTQ8WZ04 291 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 KAT5Q92993 513 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 FAM167AQ96KS9 214 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 NUP62CLQ9H1M0 184 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 MANSC1Q9H8J5 431 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 PUF60Q9UHX1 559 aaKnown RBP6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 PCDHB1Q9Y5F3 818 aa6.64□□□□□ -1.35
HMGB1P46-201ENST00000520062 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 AKR1B10O60218 316 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 MGEA5O60502 916 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 SEMA7AO75326 666 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 ARIH2O95376 493 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 COL6A1P12109 1028 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 PEX2P28328 305 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 HK3P52790 923 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 IFIT5Q13325 482 aaKnown RBP6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 SEPT2Q15019 361 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 POLD3Q15054 466 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 EIF4HQ15056 248 aaKnown RBP6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 MST1LQ2TV78 715 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 C4orf46Q504U0 113 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 PHF19Q5T6S3 580 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 MPZL3Q6UWV2 235 aa6.63□□□□□ -1.35
HMGB1P46-201ENST00000520062 FAM186BQ8IYM0 893 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms