RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 RIBC1Q8N443 379 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-207ENST00000519632 PPM1NQ8N819 430 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
SHPRH-207ENST00000519632 RAD54LQ92698 747 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 PCIF1Q9H4Z3 704 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 PP2D1A8MPX8 630 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 PTPN4P29074 926 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 LIG4P49917 911 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 ADARP55265 1226 aaKnown RBP12.98□□□□□ -0.33
SHPRH-207ENST00000519632 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-207ENST00000519632 NLRP9Q7RTR0 991 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 SGMS1Q86VZ5 419 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
SHPRH-207ENST00000519632 CALN1Q9BXU9 219 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 LACRTQ9GZZ8 138 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 DTNAQ9Y4J8 743 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 PBRM1Q86U86 1689 aa12.98□□□□□ -0.33
SHPRH-207ENST00000519632 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 hCG_1984214I3L0E3 225 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 GSTA4O15217 222 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 CALB2P22676 271 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 CPA2P48052 419 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 KPNA2P52292 529 aaKnown RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PRAMEP78395 509 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 GALNT4Q8N4A0 578 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 ZNF713Q8N859 430 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 KCTD6Q8NC69 237 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 ATL2Q8NHH9 583 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 FAF2Q96CS3 445 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 STRBPQ96SI9 672 aaKnown RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 ATP7BP35670 1465 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 NEO1Q92859 1461 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 DYTNA2CJ06 578 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 WDR64B1ANS9 1081 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 GOLGA8RI6L899 631 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 MEIS1O00470 390 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 LIN7AO14910 233 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 GSTT1P30711 240 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 HSPA13P48723 471 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 TXNRD1Q16881 649 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 USP49Q70CQ1 688 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 CCDC80Q76M96 950 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 C9orf72Q96LT7 481 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 GIMAP4Q9NUV9 329 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PKD2L2Q9NZM6 624 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PSMC3IPQ9P2W1 217 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 OPLAHO14841 1288 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 RHOBTB3O94955 611 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 TFRCP02786 760 aaKnown RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 NR3C1P04150 777 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 KRT4P19013 534 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 SERPINB1P30740 379 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 MCUQ8NE86 351 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 RBM15Q96T37 977 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 SLC13A1Q9BZW2 595 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 TMEM206Q9H813 350 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PPCSQ9HAB8 311 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 RAP1GDS1P52306 607 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 OCRLQ01968 901 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 GRIN1Q05586 938 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 LVRNQ6Q4G3 990 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 HDAC7Q8WUI4 952 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 POMGNT1Q8WZA1 660 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 CNBD2Q96M20 576 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 RPS6KC1Q96S38 1066 aa12.97□□□□□ -0.33
SHPRH-207ENST00000519632 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
SHPRH-207ENST00000519632 PMS1P54277 932 aaKnown RBP12.96□□□□□ -0.33
SHPRH-207ENST00000519632 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
SHPRH-207ENST00000519632 ACAP3Q96P50 834 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 SNX25Q9H3E2 840 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 PIH1D3Q9NQM4 214 aaKnown RBP12.96□□□□□ -0.33
SHPRH-207ENST00000519632 ARHGAP26Q9UNA1 814 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 CNBD1Q8NA66 436 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 ERGIC2Q96RQ1 377 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 CNGB3Q9NQW8 809 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 HPSEQ9Y251 543 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 TAF6LQ9Y6J9 622 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 WDR46O15213 610 aaKnown RBP12.96□□□□□ -0.33
SHPRH-207ENST00000519632 GNPATO15228 680 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 GUCY1A2P33402 732 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 SOX5P35711 763 aa12.96□□□□□ -0.33
SHPRH-207ENST00000519632 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
SHPRH-207ENST00000519632 GALCP54803 685 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms