RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 ATP6V0A2Q9Y487 856 aa5.09□□□□□ -1.59
PABPC1-212ENST00000519622 PCDHAC2Q9Y5I4 1007 aa5.09□□□□□ -1.59
PABPC1-212ENST00000519622 ATRNL1Q5VV63 1379 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ITIH6Q6UXX5 1313 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 LRRC10BA6NIK2 292 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TSPY2A6NKD2 308 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CYP26A1O43174 497 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 BBOX1O75936 387 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 PRNPP04156 253 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GYPCP04921 128 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GOLGA8HP0CJ92 632 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 PDHBP11177 359 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ATP2B1P20020 1258 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 SMARCA1P28370 1054 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CDC25AP30304 524 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 MCM7P33993 719 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 PRPHP41219 470 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ARHGAP25P42331 645 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 UBASH3AP57075 661 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GSTO1P78417 241 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 KARSQ15046 597 aaKnown RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TXNRD1Q16881 649 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 HSP90AA4PQ58FG1 418 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CT47A1Q5JQC4 288 aaPredicted RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 MFSD14BQ5SR56 506 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 SPATA1Q5VX52 437 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ARL6IP4Q66PJ3 421 aaKnown RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 APOBEC3HQ6NTF7 200 aaKnown RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TTI2Q6NXR4 508 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TOGARAM2Q6ZUX3 1019 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ZNF765Q7L2R6 523 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 SIAH1Q8IUQ4 282 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ZFPM1Q8IX07 1006 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 SP8Q8IXZ3 490 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TEX11Q8IYF3 940 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 KCT2Q8NC54 265 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GIMAP7Q8NHV1 300 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CTCFLQ8NI51 663 aaPredicted RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CRYGNQ8WXF5 182 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 STAMQ92783 540 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 SMARCE1Q969G3 411 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GSDMAQ96QA5 445 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 MTMR9Q96QG7 549 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 EYA3Q99504 573 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CCSER1Q9C0I3 900 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 BLZF1Q9H2G9 400 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 PDCL3Q9H2J4 239 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GINM1Q9NU53 330 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 BLOC1S4Q9NUP1 217 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ZNF446Q9NWS9 450 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 TRMT1Q9NXH9 659 aaKnown RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ZC3H7BQ9UGR2 993 aaKnown RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ADAM30Q9UKF2 790 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 ZNF215Q9UL58 517 aaPredicted RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 CEP131Q9UPN4 1083 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 INPP5FQ9Y2H2 1132 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 GDAQ9Y2T3 454 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 REXO2Q9Y3B8 237 aaKnown RBP5.08□□□□□ -1.6
PABPC1-212ENST00000519622 RNF114Q9Y508 228 aa5.08□□□□□ -1.6
PABPC1-212ENST00000519622 BRCA1P38398 1863 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 PHLPP2Q6ZVD8 1323 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 UPK3BL1B0FP48 263 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 KLRF2D3W0D1 207 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 UPK3BL2E5RIL1 263 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 SLC37A4O43826 429 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 MFAP3LO75121 409 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 TADA3O75528 432 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 LRIG2O94898 1065 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 TOP1P11387 765 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 H2AFXP16104 143 aaPredicted RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 SFPQP23246 707 aaKnown RBP eCLIP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 KIF5BP33176 963 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 LONP1P36776 959 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 AFMP43652 599 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 GJA8P48165 433 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 FXR1P51114 621 aaKnown RBP eCLIP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 STX17P56962 302 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 NLRP5P59047 1200 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 GRB10Q13322 594 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 GNL2Q13823 731 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 RRP1BQ14684 758 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 KCNB1Q14721 858 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 KRT31Q15323 416 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 INF2Q27J81 1249 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 COBLL1Q53SF7 1204 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 CCDC81Q6ZN84 652 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 KCNK18Q7Z418 384 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 MRPL41Q8IXM3 137 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 DRC7Q8IY82 874 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 ADSSL1Q8N142 457 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 IGSF22Q8N9C0 903 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 FAM13CQ8NE31 585 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 RBM17Q96I25 401 aaKnown RBP5.07□□□□□ -1.6
PABPC1-212ENST00000519622 MBOAT7Q96N66 472 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 WDR24Q96S15 920 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 PIGSQ96S52 555 aa5.07□□□□□ -1.6
PABPC1-212ENST00000519622 MIPEPQ99797 713 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms