RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 UBE2TQ9NPD8 197 aaPredicted RBP17.88■□□□□ 0.45
PCDHGA11-202ENST00000518882 CTTNBP2NLQ9P2B4 639 aa17.88■□□□□ 0.45
PCDHGA11-202ENST00000518882 USP21Q9UK80 565 aa17.88■□□□□ 0.45
PCDHGA11-202ENST00000518882 PCDHA3Q9Y5H8 950 aa17.88■□□□□ 0.45
PCDHGA11-202ENST00000518882 MMP13P45452 471 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 HADHBP55084 474 aaKnown RBP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 LACTB2Q53H82 288 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 C11orf63Q6NUN7 778 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 CPNE8Q86YQ8 564 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 FUKQ8N0W3 1084 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 UHMK1Q8TAS1 419 aaKnown RBP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 PGM2Q96G03 612 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 STRA6Q9BX79 667 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 UNC45AQ9H3U1 944 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 SYNGAP1Q96PV0 1343 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 TCRBV7S2A1N4TA0A589 114 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 GAS7O60861 476 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 MMEP08473 750 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 GSCP56915 257 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 SF3A3Q12874 501 aaKnown RBP eCLIP17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 CCDC91Q7Z6B0 441 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 SELENOSQ9BQE4 189 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 ZSWIM1Q9BR11 485 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 MTFR1LQ9H019 292 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 PCIF1Q9H4Z3 704 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 EMSYQ7Z589 1322 aa17.87■□□□□ 0.45
PCDHGA11-202ENST00000518882 LOXHD1Q8IVV2 1947 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ANKRD63C9JTQ0 380 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ATMINO43313 823 aaPredicted RBP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 HIP1RO75146 1068 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 CTNNA2P26232 953 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 PPP3CAQ08209 521 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 CYB5D1Q6P9G0 228 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 RPUSD2Q8IZ73 545 aaKnown RBP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 SYCP3Q8IZU3 236 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 KAT5Q92993 513 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ODF2LQ9ULJ1 636 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ARP10275 920 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 COMTP21964 271 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 FGFR4P22455 802 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 CHRNA3P32297 505 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ECE1P42892 770 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 PEX5P50542 639 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 MESDQ14696 234 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 MAEAQ7L5Y9 396 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 SLC9A9Q8IVB4 645 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 ZSWIM2Q8NEG5 633 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 EPS8L3Q8TE67 593 aaKnown RBP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 NACC1Q96RE7 527 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 PCDHB18PQ96TA0 734 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 A1CFQ9NQ94 594 aaKnown RBP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 PCYOX1Q9UHG3 505 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 RASAL2Q9UJF2 1139 aa17.86■□□□□ 0.45
PCDHGA11-202ENST00000518882 MIF4GDA9UHW6 222 aaKnown RBP17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 CHUKO15111 745 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 CCDC137Q6PK04 289 aaKnown RBP17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 STXBP4Q6ZWJ1 553 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 FAM228AQ86W67 206 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 FMNL3Q8IVF7 1028 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 HVCN1Q96D96 273 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 LXNQ9BS40 222 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 ACP6Q9NPH0 428 aa17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 GEMIN8Q9NWZ8 242 aaKnown RBP17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 COL11A2P13942 1736 aaPredicted RBP17.85■□□□□ 0.45
PCDHGA11-202ENST00000518882 CCDC169A6NNP5 214 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 RGS16O15492 202 aaPredicted RBP17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 PYGMP11217 842 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 BCRP11274 1271 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 SLCO1A2P46721 670 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 GCLMP48507 274 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 GPC5P78333 572 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 C1orf220Q5T0J3 134 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 CCDC174Q6PII3 467 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 UBL4BQ8N7F7 174 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 BTBD6Q96KE9 485 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 SPATA31A6Q5VVP1 1343 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 SGPL1O95470 568 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 ALAS1P13196 640 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 CHRNB2P17787 502 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 RFX1P22670 979 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 CDR1P51861 262 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 STAT2P52630 851 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 CLUL1Q15846 466 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 PLEKHO2Q8TD55 490 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 KDM4CQ9H3R0 1056 aa17.84■□□□□ 0.45
PCDHGA11-202ENST00000518882 K7ENM7 598 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 TCEAL1Q15170 157 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 EPC2Q52LR7 807 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 CEP55Q53EZ4 464 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 PARP9Q8IXQ6 854 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 LRRC34Q8IZ02 419 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 CD101Q93033 1021 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 SGSM3Q96HU1 749 aa17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.45
PCDHGA11-202ENST00000518882 CBWD1Q9BRT8 395 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms