RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MTSS1O43312 755 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 HNRNPLP14866 589 aaKnown RBP eCLIP5.91□□□□□ -1.46
SQLE-202ENST00000518604 CYP2C19P33261 490 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 MCAMP43121 646 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 WNT3AP56704 352 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 ADAM15Q13444 863 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 GAGE13Q4V321 117 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 NXNQ6DKJ4 435 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 CXorf57Q6NSI4 855 aaKnown RBP5.91□□□□□ -1.46
SQLE-202ENST00000518604 THEMISQ8N1K5 641 aaPredicted RBP5.91□□□□□ -1.46
SQLE-202ENST00000518604 MIER2Q8N344 545 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 GPR156Q8NFN8 814 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 SLC2A13Q96QE2 648 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 ADI1Q9BV57 179 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 SLC6A15Q9H2J7 730 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 RBM12Q9NTZ6 932 aaKnown RBP5.91□□□□□ -1.46
SQLE-202ENST00000518604 FAM184BQ9ULE4 1060 aa5.91□□□□□ -1.46
SQLE-202ENST00000518604 C2orf78A6NCI8 922 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 MARCH6O60337 910 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 SASH1O94885 1247 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 ZRANB2O95218 330 aaKnown RBP eCLIP5.9□□□□□ -1.46
SQLE-202ENST00000518604 IL33O95760 270 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 JUNP05412 331 aaKnown RBP5.9□□□□□ -1.46
SQLE-202ENST00000518604 PF4V1P10720 104 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 CTSSP25774 331 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 KIR2DL3P43628 341 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 RRADP55042 308 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 HGFACQ04756 655 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 GTF2H3Q13889 308 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 FAM102BQ5T8I3 360 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 NT5DC1Q5TFE4 455 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 GPR155Q7Z3F1 870 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 FMNL3Q8IVF7 1028 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 TCEAL8Q8IYN2 117 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 MARCH10Q8NA82 808 aaPredicted RBP5.9□□□□□ -1.46
SQLE-202ENST00000518604 PIK3C3Q8NEB9 887 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 SNX33Q8WV41 574 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 PCGF6Q9BYE7 350 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 SEC61A2Q9H9S3 476 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
SQLE-202ENST00000518604 FAM171A2A8MVW0 826 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 B4GALT3O60512 393 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 B4GALT4O60513 344 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 TMEM127O75204 238 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 SCGB1D2O95969 90 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 GASTP01350 101 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 VSIG10L2P0DP72 767 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 GSPT1P15170 499 aaKnown RBP5.89□□□□□ -1.47
SQLE-202ENST00000518604 ADCY7P51828 1080 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 CCT2P78371 535 aaKnown RBP5.89□□□□□ -1.47
SQLE-202ENST00000518604 MGAT2Q10469 447 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 TCIRG1Q13488 830 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 UBE3CQ15386 1083 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 PPM1NQ8N819 430 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 RIN2Q8WYP3 895 aaPredicted RBP5.89□□□□□ -1.47
SQLE-202ENST00000518604 RELTQ969Z4 430 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 COA7Q96BR5 231 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 USP40Q9NVE5 1235 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 GEMIN8Q9NWZ8 242 aaKnown RBP5.89□□□□□ -1.47
SQLE-202ENST00000518604 PTPN22Q9Y2R2 807 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 NR2E1Q9Y466 385 aa5.89□□□□□ -1.47
SQLE-202ENST00000518604 RBM8AQ9Y5S9 174 aaKnown RBP5.89□□□□□ -1.47
SQLE-202ENST00000518604 GOLGA6CA6NDK9 693 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 GOLGA6BA6NDN3 693 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 NRP1O14786 923 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 TRIM13O60858 407 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 ALDH1A2O94788 518 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 GOLGA6DP0CG33 693 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 ZSCAN22P10073 491 aaPredicted RBP5.88□□□□□ -1.47
SQLE-202ENST00000518604 PPP2CBP62714 309 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 PPP2CAP67775 309 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 KIF23Q02241 960 aaPredicted RBP5.88□□□□□ -1.47
SQLE-202ENST00000518604 PPP3CAQ08209 521 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
SQLE-202ENST00000518604 CCDC181Q5TID7 509 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 ARHGEF18Q6ZSZ5 1173 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 GOLGA6AQ9NYA3 693 aa5.88□□□□□ -1.47
SQLE-202ENST00000518604 PUF60Q9UHX1 559 aaKnown RBP5.88□□□□□ -1.47
SQLE-202ENST00000518604 AKR1B10O60218 316 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 PRAMEF4O60810 478 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 TOX4O94842 621 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 ENDOD1O94919 500 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 BPIFB4P59827 614 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 RAC3P60763 192 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 ATP2C1P98194 919 aaPredicted RBP5.87□□□□□ -1.47
SQLE-202ENST00000518604 LRRC41Q15345 812 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 TBR1Q16650 682 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 RNF151Q2KHN1 245 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 HSP90AB2PQ58FF8 381 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 MYO1HQ8N1T3 1032 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 NRG4Q8WWG1 115 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 HDAC10Q969S8 669 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 KCNC2Q96PR1 638 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 DNM3Q9UQ16 869 aa5.87□□□□□ -1.47
SQLE-202ENST00000518604 SLC26A4O43511 780 aa5.86□□□□□ -1.47
SQLE-202ENST00000518604 CNOT4O95628 575 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms