RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 FGD1P98174 961 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 AKAP17AQ02040 695 aaKnown RBP10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 XKR3Q5GH77 459 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 LRCH2Q5VUJ6 765 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 MIER3Q7Z3K6 550 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 C1orf210Q8IVY1 113 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 PIP4P2Q8N4L2 257 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 SLC44A3Q8N4M1 653 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 CCDC148Q8NFR7 591 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 RDM1Q8NG50 284 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 GPR152Q8TDT2 470 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 SECISBP2LQ93073 1101 aaKnown RBP10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 PHKBQ93100 1093 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 BORCS6Q96GS4 357 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 NLRP4Q96MN2 994 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 RIT2Q99578 217 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 LSG1Q9H089 658 aaKnown RBP10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 ZMYND12Q9H0C1 365 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 ANO2Q9NQ90 1003 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 SUCLA2Q9P2R7 463 aaPredicted RBP10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 NCDNQ9UBB6 729 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 DMDP11532 3685 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 ARID2Q68CP9 1835 aa10.18□□□□□ -0.78
LINCR-0001-201ENST00000517732 DOCK6Q96HP0 2047 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 CEP250Q9BV73 2442 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 NRP1O14786 923 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 DCNP07585 359 aaKnown RBP10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 FUT2Q10981 343 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 DRP2Q13474 957 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 TARBP2Q15633 366 aaKnown RBP10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 UGCGQ16739 394 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 DCLRE1AQ6PJP8 1040 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 GET4Q7L5D6 327 aaPredicted RBP10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 ZNF280BQ86YH2 543 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 CNNM3Q8NE01 707 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 FEZF2Q8TBJ5 459 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 RPS6KC1Q96S38 1066 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 VN1R3Q9BXE9 311 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 NIFKQ9BYG3 293 aaKnown RBP10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 PLEKHA4Q9H4M7 779 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 UBN1Q9NPG3 1134 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 AGPAT5Q9NUQ2 364 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 DLL3Q9NYJ7 618 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 PCDHB2Q9Y5E7 798 aa10.17□□□□□ -0.78
LINCR-0001-201ENST00000517732 RALGAPA1Q6GYQ0 2036 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 SPTLC1O15269 473 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 MSH4O15457 936 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 TEX28O15482 410 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 LILRB3O75022 631 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 N4BP1O75113 896 aaKnown RBP10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 DDHD2O94830 711 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 POMCP01189 267 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 CDC27P30260 824 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 OR1G1P47890 313 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 CREMQ03060 361 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 RSPO4Q2I0M5 234 aaPredicted RBP10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 EXOC8Q8IYI6 725 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 PJA1Q8NG27 643 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 TCEANC2Q96MN5 208 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 MYADMQ96S97 322 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 ESYT1Q9BSJ8 1104 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 BCO2Q9BYV7 579 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 C22orf23Q9BZE7 217 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 UNC45AQ9H3U1 944 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 SLC2A4RGQ9NR83 387 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 ZDHHC7Q9NXF8 308 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 PRG3Q9Y2Y8 225 aaPredicted RBP10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 ZFP37Q9Y6Q3 630 aaPredicted RBP10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 DCHS1Q96JQ0 3298 aa10.16□□□□□ -0.78
LINCR-0001-201ENST00000517732 ZNF292O60281 2723 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 IGKV6-21A0A0C4DH24 114 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 DDX11L8A8MPP1 907 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 LAMTOR5O43504 91 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 DKC1O60832 514 aaKnown RBP eCLIP10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 MAFO75444 373 aaPredicted RBP10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 ERLIN2O94905 339 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 C1RP00736 705 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 MYBP10242 640 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 LAMP2P13473 410 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 ITGA4P13612 1032 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 MAGEA9P43362 315 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 USP11P51784 963 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 COL9A3Q14050 684 aaPredicted RBP10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 KRT32Q14532 448 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 AGMOQ6ZNB7 445 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 SRGAP1Q7Z6B7 1085 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 MRPL10Q7Z7H8 261 aaKnown RBP10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 HACE1Q8IYU2 909 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 DCLK2Q8N568 766 aa10.15□□□□□ -0.78
LINCR-0001-201ENST00000517732 SLC7A3Q8WY07 619 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms