RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ERLIN2O94905 339 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SP100P23497 879 aaPredicted RBP16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SLC11A1P49279 550 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 AGMOQ6ZNB7 445 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 TDRD5Q8NAT2 981 aaKnown RBP16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 KREMEN2Q8NCW0 462 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SLC22A17Q8WUG5 538 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 BCL7CQ8WUZ0 217 aaPredicted RBP16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 HAS1Q92839 578 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 TMEM143Q96AN5 459 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 FAM193BQ96PV7 902 aaPredicted RBP16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 EMILIN2Q9BXX0 1053 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SFXN1Q9H9B4 322 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 UBN1Q9NPG3 1134 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 DENND4AQ7Z401 1863 aa16.3■□□□□ 0.2
SCARNA20.5-201ENST00000516991 C2CD4DB7Z1M9 353 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 NCLP19338 710 aaKnown RBP16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 AXLP30530 894 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 NUBP1P53384 320 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ANAPC15P60006 121 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 PTPN14Q15678 1187 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ATAT1Q5SQI0 421 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 FERMT3Q86UX7 667 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 CABP7Q86V35 215 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ZDHHC14Q8IZN3 488 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 RNF149Q8NC42 400 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 OXER1Q8TDS5 423 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 AUTS2Q8WXX7 1259 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 MTRQ99707 1265 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 TPCN1Q9ULQ1 816 aa16.29■□□□□ 0.2
SCARNA20.5-201ENST00000516991 EPCAMP16422 314 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 HOXA11P31270 313 aaPredicted RBP16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 KRT2P35908 639 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SPIRE1Q08AE8 756 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 NCBP1Q09161 790 aaKnown RBP16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 TFDP1Q14186 410 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 IER5LQ5T953 404 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ZNF280BQ86YH2 543 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 DYDC2Q96IM9 177 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 MINDY3Q9H8M7 445 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 CDH22Q9UJ99 828 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 DBR1Q9UK59 544 aaKnown RBP16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 FAN1Q9Y2M0 1017 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
SCARNA20.5-201ENST00000516991 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 B4GALT3O60512 393 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ALDH2P05091 517 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ITGA4P13612 1032 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 AVPR2P30518 371 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 VCPP55072 806 aaKnown RBP16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 CYP4A11Q02928 519 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 NOTUMQ6P988 496 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 HACE1Q8IYU2 909 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 CCDC43Q96MW1 224 aaKnown RBP16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 VN1R3Q9BXE9 311 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 MRPL17Q9NRX2 175 aaKnown RBP16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.2
SCARNA20.5-201ENST00000516991 INPPL1O15357 1258 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 DDHD2O94830 711 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 LYPLA2O95372 231 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CTDNEP1O95476 244 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 URODP06132 367 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 KLRC2P26717 231 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 PTENP60484 403 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TCF15Q12870 199 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CTTNQ14247 550 aaKnown RBP16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 CCDC149Q6ZUS6 474 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TPH2Q8IWU9 490 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 C12orf76Q8N812 135 aaPredicted RBP16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ACSF2Q96CM8 615 aaPredicted RBP16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 EIF2AK1Q9BQI3 630 aaKnown RBP16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 HERC2P3Q9BVR0 1158 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ANKEF1Q9NU02 776 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 DPP7Q9UHL4 492 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
SCARNA20.5-201ENST00000516991 NRP1O14786 923 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 TSPAN1O60635 241 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 DGAT1O75907 488 aa16.25■□□□□ 0.19
SCARNA20.5-201ENST00000516991 BRD1O95696 1058 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms