RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
RN7SKP253-201ENST00000516424 CBLCQ9ULV8 474 aa7.34□□□□□ -1.23
RN7SKP253-201ENST00000516424 MED1Q15648 1581 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 AQP7O14520 342 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 ADCY3O60266 1144 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 C1SP09871 688 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 AOAHP28039 575 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 RRP1P56182 461 aaKnown RBP7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 IRX6P78412 446 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 MAMDC2Q7Z304 686 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 ZNF808Q8N4W9 903 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 IL17DQ8TAD2 202 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 FBXW5Q969U6 566 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 FAM89AQ96GI7 184 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 BTBD7Q9P203 1132 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 CDC42EP3Q9UKI2 254 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 LTBP4Q8N2S1 1624 aa7.33□□□□□ -1.24
RN7SKP253-201ENST00000516424 PRAMEF25A6NGN4 478 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 KCNK3O14649 394 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 C4BPAP04003 597 aaKnown RBP7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 JAM2P57087 298 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 PTPRN2Q92932 1015 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 CHFRQ96EP1 664 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 MYH16Q9H6N6 1097 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 GALNT8Q9NY28 637 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 PUF60Q9UHX1 559 aaKnown RBP7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 FBXO10Q9UK96 956 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 COL18A1P39060 1754 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 TNS3Q68CZ2 1445 aa7.32□□□□□ -1.24
RN7SKP253-201ENST00000516424 CT47B1P0C2W7 299 aaPredicted RBP7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 SRGAP2CP0DJJ0 459 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 GJA4P35212 333 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 RPS19P39019 145 aaKnown RBP7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 FOXL1Q12952 345 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 NCAPD2Q15021 1401 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 EIF4HQ15056 248 aaKnown RBP7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 STILQ15468 1287 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 NBPF6Q5VWK0 638 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 CXXC5Q7LFL8 322 aaKnown RBP7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 SCUBE1Q8IWY4 988 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 CACTINQ8WUQ7 758 aaKnown RBP7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 ZNF669Q96BR6 464 aaPredicted RBP7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 WNK4Q96J92 1243 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 NBPF4Q96M43 638 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 PLEKHG4BQ96PX9 1271 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 RGPD5Q99666 1765 aa7.31□□□□□ -1.24
RN7SKP253-201ENST00000516424 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 ARVCFO00192 962 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 HTATSF1O43719 755 aaKnown RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 MPIG6BO95866 241 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 C6orf222P0C671 652 aaPredicted RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 ACRV1P26436 265 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 MCM7P33993 719 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 MSX2P35548 267 aaPredicted RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 RARSP54136 660 aaKnown RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 GUCY1A3Q02108 690 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 CALD1Q05682 793 aaKnown RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 LMOD3Q0VAK6 560 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 MTHFSDQ2M296 383 aaKnown RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 FOXB2Q5VYV0 432 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 LRSAM1Q6UWE0 723 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 USP30Q70CQ3 517 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 C16orf59Q7L2K0 433 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 OTOP2Q7RTS6 562 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 CDC6Q99741 560 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 THUMPD2Q9BTF0 503 aaKnown RBP7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 AMNQ9BXJ7 453 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 TRIM55Q9BYV6 548 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 TRIM8Q9BZR9 551 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 SMURF1Q9HCE7 757 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 IFT57Q9NWB7 429 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 C11orf21Q9P2W6 132 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 RGPD2P0DJD1 1756 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 CPDO75976 1380 aa7.3□□□□□ -1.24
RN7SKP253-201ENST00000516424 TRBV23-1A0A0A0MS06 115 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 FAM83GA6ND36 823 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 CHL1O00533 1208 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 PLIN1O60240 522 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 BCAR3O75815 825 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 ZC3H6P61129 1189 aaKnown RBP7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 ST5P78524 1137 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 CD83Q01151 205 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 PCOLCEQ15113 449 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 SEC23AQ15436 765 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 CRY1Q16526 586 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 FAM209AQ5JX71 171 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 TRIM68Q6AZZ1 485 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 AMER2Q8N7J2 671 aa7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 TSR2Q969E8 191 aaKnown RBP7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 LTV1Q96GA3 475 aaPredicted RBP7.29□□□□□ -1.24
RN7SKP253-201ENST00000516424 BTBD2Q9BX70 525 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms