RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	PRKCE	Q02156	737 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	MTERF2	Q49AM1	385 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	TRIM50	Q86XT4	487 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	GPRC5A	Q8NFJ5	357 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	EDEM3	Q9BZQ6	932 aa		11.44	□□□□□ -0.58
CDK18-222	ENST00000515494	PFAS	O15067	1338 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	DCAF8L1	A6NGE4	600 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	SPATA31C2	B4DYI2	1134 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	ANKRD63	C9JTQ0	380 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	GGPS1	O95749	300 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	UBA1	P22314	1058 aa	Known RBP	11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	NPTX2	P47972	431 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	IQCE	Q6IPM2	695 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	SRGAP1	Q7Z6B7	1085 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	SAAL1	Q96ER3	474 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	RHOXF2B	P0C7M4	288 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	NBPF20	Q3BBV1	942 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	RSRC2	Q7L4I2	434 aa	Known RBP	11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	IRF2BP2	Q7Z5L9	587 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	SUGP1	Q8IWZ8	645 aa	Known RBP	11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	NOA1	Q8NC60	698 aa	Known RBP	11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	RHOXF2	Q9BQY4	288 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	NCK2	O43639	380 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	PHACTR2	O75167	634 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	GFPT2	O94808	682 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	STBD1	O95210	358 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	CXCR5	P32302	372 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	GCLM	P48507	274 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	PTPRO	Q16827	1216 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	XRRA1	Q6P2D8	792 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	PPP1R13L	Q8WUF5	828 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	FGD4	Q96M96	766 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	ACCS	Q96QU6	501 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	CEP89	Q96ST8	783 aa		11.43	□□□□□ -0.58
CDK18-222	ENST00000515494	ADGRA3	Q8IWK6	1321 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	DENND3	A2RUS2	1198 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PPP1R12A	O14974	1030 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PSAP	P07602	524 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	BFSP1	Q12934	665 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ARHGAP44	Q17R89	818 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	SWT1	Q5T5J6	900 aa	Known RBP	11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PLEKHO2	Q8TD55	490 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ZNF668	Q96K58	619 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ZIC5	Q96T25	663 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	XPNPEP1	Q9NQW7	623 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	HSPBP1	Q9NZL4	362 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PNMA3	Q9UL41	463 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	SSU72P8	A0A1W2PR75	194 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	CCDC189	A1A4V9	331 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	TBC1D8	O95759	1140 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	SLC25A27	O95847	323 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ADORA2A	P29274	412 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	LIG3	P49916	1009 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	CORO7	P57737	925 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	TTC19	Q6DKK2	380 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	CHADL	Q6NUI6	762 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ABHD15	Q6UXT9	468 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	CBWD2	Q8IUF1	395 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	TMEM161B	Q8NDZ6	487 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	DNER	Q8NFT8	737 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	GOLGA1	Q92805	767 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ATP6V0A1	Q93050	837 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	CCDC127	Q96BQ5	260 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ZBTB10	Q96DT7	871 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	MMS19	Q96T76	1030 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	HINFP	Q9BQA5	517 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PLCB1	Q9NQ66	1216 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ANKEF1	Q9NU02	776 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	AIPL1	Q9NZN9	384 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	SAR1B	Q9Y6B6	198 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	MAFG	O15525	162 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	LCA5L	O95447	670 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ATP4A	P20648	1035 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	ADSS	P30520	456 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	USP8	P40818	1118 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	GTF2B	Q00403	316 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PPP3CA	Q08209	521 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	TRAPPC11	Q7Z392	1133 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	TMEM143	Q96AN5	459 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	POP1	Q99575	1024 aa	Known RBP	11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	PARD6B	Q9BYG5	372 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	KMT5A	Q9NQR1	393 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	SMARCAL1	Q9NZC9	954 aa		11.42	□□□□□ -0.58
CDK18-222	ENST00000515494	EMSY	Q7Z589	1322 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	LCT	P09848	1927 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	SOCS7	O14512	581 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	KLRC1	P26715	233 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	MYL7	Q01449	175 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	DMP1	Q13316	513 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	KIAA0753	Q2KHM9	967 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	HSDL1	Q3SXM5	330 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	TADA2B	Q86TJ2	420 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	IWS1	Q96ST2	819 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	NUCKS1	Q9H1E3	243 aa	Known RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	GOLPH3	Q9H4A6	298 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	EHD2	Q9NZN4	543 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	ABT1	Q9ULW3	272 aa	Known RBP	11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	IVNS1ABP	Q9Y6Y0	642 aa		11.41	□□□□□ -0.58
CDK18-222	ENST00000515494	UBE4B	O95155	1302 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms