RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 ARL6IP4Q66PJ3 421 aaKnown RBP15.36■□□□□ 0.05
TRIO-222ENST00000515144 GPD1LQ8N335 351 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 IGFLR1Q9H665 355 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 ABI2Q9NYB9 513 aaPredicted RBP15.36■□□□□ 0.05
TRIO-222ENST00000515144 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 NPTXRO95502 500 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 TRIM67Q6ZTA4 783 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 PPFIBP2Q8ND30 876 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 PDZD8Q8NEN9 1154 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 NUP85Q9BW27 656 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 TJP3O95049 919 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 ECEL1O95672 775 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 PAMP19021 973 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 WEE1P30291 646 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 TOGARAM2Q6ZUX3 1019 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 RNF25Q96BH1 459 aaPredicted RBP15.36■□□□□ 0.05
TRIO-222ENST00000515144 TACO1Q9BSH4 297 aaKnown RBP15.36■□□□□ 0.05
TRIO-222ENST00000515144 TAS2R42Q7RTR8 314 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 CABS1Q96KC9 395 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 SERPINB6P35237 376 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 ZNF543Q08ER8 600 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 FAM151AQ8WW52 585 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 SH3KBP1Q96B97 665 aa15.36■□□□□ 0.05
TRIO-222ENST00000515144 RSPH10B2B2RC85 870 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 RSPH10BP0C881 870 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 NCF2P19878 526 aaPredicted RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 CCNE1P24864 410 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 NLRP11P59045 1033 aaKnown RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 PRKCEQ02156 737 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 KCNA1Q09470 495 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 PYROXD1Q8WU10 500 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 FHDC1Q9C0D6 1143 aaPredicted RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 PRG3Q9Y2Y8 225 aaPredicted RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 TRIM17Q9Y577 477 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 PFASO15067 1338 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 CCDC78A2IDD5 438 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 CYP2C9P11712 490 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 SEZ6Q53EL9 994 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 ANKRD40Q6AI12 368 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 MB21D1Q8N884 522 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 SLC30A5Q8TAD4 765 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 LTN1O94822 1766 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 CD163L1Q9NR16 1453 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 ZC3H11AO75152 810 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRIO-222ENST00000515144 VCPP55072 806 aaKnown RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 SNX19Q92543 992 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 VCPKMTQ9H867 229 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 SH3BP1Q9Y3L3 701 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 VEGFAP15692 232 aaPredicted RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 ASPHQ12797 758 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 KIF19Q2TAC6 998 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 NUDT18Q6ZVK8 323 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 THOC1Q96FV9 657 aaKnown RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 ATP1A3P13637 1013 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 TCP1P17987 556 aaKnown RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 THEMIS2Q5TEJ8 643 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 FAM71BQ8TC56 605 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 SPDL1Q96EA4 605 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 AGAP3Q96P47 875 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 A0A1W2PQ27 194 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 A0A1W2PQ64 194 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 A0A1W2PQD8 194 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 NFKBIAP25963 317 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 SULT1E1P49888 294 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 KRT17Q04695 432 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
TRIO-222ENST00000515144 WDR72Q3MJ13 1102 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 ASNSD1Q9NWL6 643 aa15.35■□□□□ 0.05
TRIO-222ENST00000515144 AGRPO00253 132 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 TRAPPC3O43617 180 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 KLC3Q6P597 504 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 C16orf86Q6ZW13 317 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 TCF7P36402 384 aaPredicted RBP15.34■□□□□ 0.05
TRIO-222ENST00000515144 GSTA4O15217 222 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 TRPA1O75762 1119 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 KITP10721 976 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 CLCN1P35523 988 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 POU5F1BQ06416 359 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 C17orf102A2RUQ5 167 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 PHLPP1O60346 1717 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 RNF40O75150 1001 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 DDHD2O94830 711 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 IL31Q6EBC2 164 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 PGBD4Q96DM1 585 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 COG4Q9H9E3 785 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 PRPF4O43172 522 aaKnown RBP eCLIP15.34■□□□□ 0.054e-6■□□□□ 9.9
TRIO-222ENST00000515144 CYBBP04839 570 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 MAP7Q14244 749 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 GLB1LQ6UWU2 654 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 VCX3BQ9H321 246 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 CFAP69A5D8W1 941 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 GNGT2O14610 69 aa15.34■□□□□ 0.05
TRIO-222ENST00000515144 CTNND1O60716 968 aaKnown RBP15.34■□□□□ 0.05
TRIO-222ENST00000515144 IGFBP4P22692 258 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms