RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 MRPL10Q7Z7H8 261 aaKnown RBP27.16■■□□□ 1.94
SNF8-213ENST00000514929 CNNM3Q8NE01 707 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 URGCPQ8TCY9 931 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 CCDC51Q96ER9 411 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 CPB2Q96IY4 423 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 BACH2Q9BYV9 841 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 TLE6Q9H808 572 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 KIAA1024Q9UPX6 916 aa27.16■■□□□ 1.94
SNF8-213ENST00000514929 GRXCR2A6NFK2 248 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 ZC3H11AO75152 810 aaKnown RBP eCLIP27.15■■□□□ 1.94
SNF8-213ENST00000514929 CYP11B2P19099 503 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 BCAR1P56945 870 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 ADAM15Q13444 863 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 ECM1Q16610 540 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 KRT79Q5XKE5 535 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 AGMOQ6ZNB7 445 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 SLC39A11Q8N1S5 342 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 RSAD1Q9HA92 442 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 ENTPD7Q9NQZ7 604 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 DDX19AQ9NUU7 478 aaKnown RBP27.15■■□□□ 1.94
SNF8-213ENST00000514929 TBC1D13Q9NVG8 400 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 FAM50BQ9Y247 325 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 CNTNAP2Q9UHC6 1331 aa27.15■■□□□ 1.94
SNF8-213ENST00000514929 NT5C1B-RDH14C9J2C7 533 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 IL9P15248 144 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 NDUFV1P49821 464 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 DLX2Q07687 328 aaPredicted RBP27.14■■□□□ 1.94
SNF8-213ENST00000514929 PLPP4Q5VZY2 271 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 EFHBQ8N7U6 833 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 TCF25Q9BQ70 676 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 CSRNP2Q9H175 543 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 BHMT2Q9H2M3 363 aa27.14■■□□□ 1.94
SNF8-213ENST00000514929 PP2D1A8MPX8 630 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 TBX10O75333 385 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 ITGA4P13612 1032 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 NCLP19338 710 aaKnown RBP27.13■■□□□ 1.93
SNF8-213ENST00000514929 CLUL1Q15846 466 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 IL17AQ16552 155 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 AMHR2Q16671 573 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 ZBTB8OSQ8IWT0 167 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 TMEM169Q96HH4 297 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 EIF2AQ9BY44 585 aaKnown RBP27.13■■□□□ 1.93
SNF8-213ENST00000514929 TRIM6Q9C030 488 aaPredicted RBP27.13■■□□□ 1.93
SNF8-213ENST00000514929 GBP3Q9H0R5 595 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 NRDE2Q9H7Z3 1164 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 IPPQ9Y573 584 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 MUC3AQ02505 3323 aa27.13■■□□□ 1.93
SNF8-213ENST00000514929 CARNS1A5YM72 827 aa27.12■■□□□ 1.93
SNF8-213ENST00000514929 FSCN2O14926 492 aa27.12■■□□□ 1.93
SNF8-213ENST00000514929 PER2O15055 1255 aa27.12■■□□□ 1.93
SNF8-213ENST00000514929 ARF4P18085 180 aaPredicted RBP27.12■■□□□ 1.93
SNF8-213ENST00000514929 ATP2C1P98194 919 aaPredicted RBP27.12■■□□□ 1.93
SNF8-213ENST00000514929 TMC7Q7Z402 723 aa27.12■■□□□ 1.93
SNF8-213ENST00000514929 SMG8Q8ND04 991 aaKnown RBP27.12■■□□□ 1.93
SNF8-213ENST00000514929 C2orf40Q9H1Z8 148 aa27.12■■□□□ 1.93
SNF8-213ENST00000514929 NGRNQ9NPE2 291 aaKnown RBP27.12■■□□□ 1.93
SNF8-213ENST00000514929 UBN1Q9NPG3 1134 aa27.12■■□□□ 1.93
SNF8-213ENST00000514929 B4GALT5O43286 388 aa27.11■■□□□ 1.93
SNF8-213ENST00000514929 CDC25AP30304 524 aa27.11■■□□□ 1.93
SNF8-213ENST00000514929 CUL4AQ13619 759 aa27.11■■□□□ 1.93
SNF8-213ENST00000514929 PRMT7Q9NVM4 692 aaPredicted RBP27.11■■□□□ 1.93
SNF8-213ENST00000514929 KANSL3Q9P2N6 904 aa27.11■■□□□ 1.93
SNF8-213ENST00000514929 DNM3Q9UQ16 869 aa27.11■■□□□ 1.93
SNF8-213ENST00000514929 FSD2A1L4K1 749 aa27.1■■□□□ 1.93
SNF8-213ENST00000514929 CDCA2Q69YH5 1023 aaPredicted RBP27.1■■□□□ 1.93
SNF8-213ENST00000514929 FAM178BQ8IXR5 827 aa27.1■■□□□ 1.93
SNF8-213ENST00000514929 HACE1Q8IYU2 909 aa27.1■■□□□ 1.93
SNF8-213ENST00000514929 BSNDQ8WZ55 320 aa27.1■■□□□ 1.93
SNF8-213ENST00000514929 FAM193BQ96PV7 902 aaPredicted RBP27.1■■□□□ 1.93
SNF8-213ENST00000514929 CDCA3Q99618 268 aaPredicted RBP27.1■■□□□ 1.93
SNF8-213ENST00000514929 DNAJB4Q9UDY4 337 aa27.1■■□□□ 1.93
SNF8-213ENST00000514929 CD207Q9UJ71 328 aa27.1■■□□□ 1.93
SNF8-213ENST00000514929 E9PMD0 336 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 POMCP01189 267 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 NAMPTP43490 491 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 PPP2R5AQ15172 486 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 DUSP6Q16828 381 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 SLC27A1Q6PCB7 646 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 CDR2LQ86X02 465 aaPredicted RBP27.09■■□□□ 1.93
SNF8-213ENST00000514929 ZNF280BQ86YH2 543 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 DEPTORQ8TB45 409 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 KIFAP3Q92845 792 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 IFT74Q96LB3 600 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 PRIMPOLQ96LW4 560 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 APOL6Q9BWW8 343 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 HES2Q9Y543 173 aa27.09■■□□□ 1.93
SNF8-213ENST00000514929 VWA3AA6NCI4 1184 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 EYA4O95677 639 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 GALTP07902 379 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 CA8P35219 290 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 AFF1P51825 1210 aaKnown RBP27.08■■□□□ 1.93
SNF8-213ENST00000514929 SMC1AQ14683 1233 aaKnown RBP27.08■■□□□ 1.93
SNF8-213ENST00000514929 BMS1Q14692 1282 aaKnown RBP27.08■■□□□ 1.93
SNF8-213ENST00000514929 ZRSR1Q15695 479 aaKnown RBP27.08■■□□□ 1.93
SNF8-213ENST00000514929 TMEM132AQ24JP5 1023 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 PPP4R3CPQ6ZMV5 832 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 TMEM173Q86WV6 379 aaPredicted RBP27.08■■□□□ 1.93
SNF8-213ENST00000514929 IGSF21Q96ID5 467 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 RNF39Q9H2S5 420 aa27.08■■□□□ 1.93
SNF8-213ENST00000514929 POLD4Q9HCU8 107 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms