RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 CALM3P0DP25 149 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 SKIP12755 728 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 RXRAP19793 462 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 ZNF76P36508 570 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 HTR4Q13639 388 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 B4GALNT3Q6L9W6 998 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
CAST-239ENST00000513666 ELMSAN1Q6PJG2 1045 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 TMTC3Q6ZXV5 915 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 PLA2G4DQ86XP0 818 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
CAST-239ENST00000513666 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 SHDQ96IW2 340 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 SCLT1Q96NL6 688 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 DPP7Q9UHL4 492 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 INPP5FQ9Y2H2 1132 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 PCDHGA2Q9Y5H1 932 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 BAHCC1Q9P281 2608 aa10.16□□□□□ -0.78
CAST-239ENST00000513666 IGLV3-22A0A075B6J6 115 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 DCDC2BA2VCK2 349 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 MEIS3P2A8K0S8 358 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 LAMTOR5O43504 91 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 B4GALT3O60512 393 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 CSDE1O75534 798 aaKnown RBP10.15□□□□□ -0.78
CAST-239ENST00000513666 OFD1O75665 1012 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 ADH1AP07327 375 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 LAMP2P13473 410 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 ADCY7P51828 1080 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 NAPAP54920 295 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 AP3B2Q13367 1082 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 WWC2Q6AWC2 1192 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 TWF2Q6IBS0 349 aaKnown RBP10.15□□□□□ -0.78
CAST-239ENST00000513666 TYW1BQ6NUM6 668 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 PPP1R18Q6NYC8 613 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 CASC1Q6TDU7 716 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 ZNF280BQ86YH2 543 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 SMG7Q92540 1137 aaKnown RBP10.15□□□□□ -0.78
CAST-239ENST00000513666 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.78
CAST-239ENST00000513666 ZNF707Q96C28 371 aaPredicted RBP10.15□□□□□ -0.78
CAST-239ENST00000513666 GBP3Q9H0R5 595 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 TBC1D22BQ9NU19 505 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 SPATA6Q9NWH7 488 aaPredicted RBP10.15□□□□□ -0.78
CAST-239ENST00000513666 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.15□□□□□ -0.78
CAST-239ENST00000513666 GABBR1Q9UBS5 961 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 PCDHA10Q9Y5I2 948 aa10.15□□□□□ -0.78
CAST-239ENST00000513666 SH2B2O14492 632 aaPredicted RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 TEX28O15482 410 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 PRC1O43663 620 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 ZNF623O75123 536 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 GLUD1P00367 558 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 SOD2P04179 222 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 URODP06132 367 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 RAB27AP51159 221 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 NUCB1Q02818 461 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 LONRF3Q496Y0 759 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 ZBTB44Q8NCP5 570 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 HDAC7Q8WUI4 952 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 ATRIPQ8WXE1 791 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 RPS6KC1Q96S38 1066 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 ZNF577Q9BSK1 485 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 DDX23Q9BUQ8 820 aaKnown RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 HERC2P3Q9BVR0 1158 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 BCO2Q9BYV7 579 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 GCOM2Q9BZD3 368 aaPredicted RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 EPC1Q9H2F5 836 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 FAM105AQ9NUU6 356 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 SMG5Q9UPR3 1016 aaKnown RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 NUMBLQ9Y6R0 609 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 MYH15Q9Y2K3 1946 aa10.14□□□□□ -0.79
CAST-239ENST00000513666 MTCL1Q9Y4B5 1905 aaKnown RBP10.14□□□□□ -0.79
CAST-239ENST00000513666 KANSL1LA0AUZ9 987 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 C2CD2LO14523 706 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 ZNF862O60290 1169 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 LILRB5O75023 590 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 RFPL2O75678 378 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 DDHD2O94830 711 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 OATP04181 439 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 CYP3A4P08684 503 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 TGM1P22735 817 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 SFPQP23246 707 aaKnown RBP eCLIP10.13□□□□□ -0.79
CAST-239ENST00000513666 LIFRP42702 1097 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 AK2P54819 239 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 CDC42EP1Q00587 391 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 CSTF1Q05048 431 aaKnown RBP10.13□□□□□ -0.79
CAST-239ENST00000513666 GET4Q7L5D6 327 aaPredicted RBP10.13□□□□□ -0.79
CAST-239ENST00000513666 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 FANCBQ8NB91 859 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 URGCPQ8TCY9 931 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 CRYGNQ8WXF5 182 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 NELL1Q92832 810 aa10.13□□□□□ -0.79
CAST-239ENST00000513666 TMEM87BQ96K49 555 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms