RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 FAM3CQ92520 227 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 TTC14Q96N46 770 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 PCYT2Q99447 389 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 AMNQ9BXJ7 453 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 JMJD4Q9H9V9 463 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 RXFP1Q9HBX9 757 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 TBC1D13Q9NVG8 400 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 SSX2IPQ9Y2D8 614 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 UBR5O95071 2799 aaPredicted RBP10.77□□□□□ -0.69
CLCN3-208ENST00000512813 C2CD2LO14523 706 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 CDX4O14627 284 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 IPO8O15397 1037 aaKnown RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 RNF113AO15541 343 aaKnown RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 ZMYND10O75800 440 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 SOD2P04179 222 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 SPATA31D3P0C874 917 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 RDXP35241 583 aaKnown RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 SIM1P81133 766 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 KIZQ2M2Z5 673 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 SPATA31D4Q6ZUB0 917 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 GRASPQ7Z6J2 395 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 RAB44Q7Z6P3 723 aaPredicted RBP10.76□□□□□ -0.69
CLCN3-208ENST00000512813 CHCHD4Q8N4Q1 142 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 TMEM57Q8N5G2 664 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 CRELD1Q96HD1 420 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 HERC2P3Q9BVR0 1158 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 SLC32A1Q9H598 525 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 JADE2Q9NQC1 790 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 RTEL1Q9NZ71 1219 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 ANAPC4Q9UJX5 808 aa10.76□□□□□ -0.69
CLCN3-208ENST00000512813 COL12A1Q99715 3063 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 CCDC163A0A0D9SF12 145 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 SPAARA0A1B0GVQ0 90 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 GCOM1H8Y6P7 765 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-208ENST00000512813 B4GALT3O60512 393 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 ZFYP08048 801 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-208ENST00000512813 POLR2MP0CAP2 368 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 KCNA2P16389 499 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 NTHL1P78549 312 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 LRRC32Q14392 662 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 FCHSD1Q86WN1 690 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 NPAS3Q8IXF0 933 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 TRMT2AQ8IZ69 625 aaKnown RBP10.75□□□□□ -0.69
CLCN3-208ENST00000512813 ITFG1Q8TB96 612 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 MDM1Q8TC05 714 aa10.75□□□□□ -0.69
CLCN3-208ENST00000512813 NOTCH2Q04721 2471 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 TGM5O43548 720 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 GAS2O43903 313 aaKnown RBP10.74□□□□□ -0.69
CLCN3-208ENST00000512813 DHX16O60231 1041 aaKnown RBP10.74□□□□□ -0.69
CLCN3-208ENST00000512813 PPP1R11O60927 126 aaPredicted RBP10.74□□□□□ -0.69
CLCN3-208ENST00000512813 ABCB7O75027 752 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 ATP9AO75110 1047 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 GPR32O75388 356 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 KRT38O76015 456 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 CAVIN2O95810 425 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 CCDC192P0DO97 292 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 KLRC1P26715 233 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 HOXC13P31276 330 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 ASPRV1Q53RT3 343 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 NOMO2Q5JPE7 1267 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 PPP1R16BQ96T49 567 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 PLA2G2FQ9BZM2 168 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 AZI2Q9H6S1 392 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 TRPV5Q9NQA5 729 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 C2orf42Q9NWW7 574 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 DKK4Q9UBT3 224 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 PIAS3Q9Y6X2 628 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 COL6A6A6NMZ7 2263 aa10.74□□□□□ -0.69
CLCN3-208ENST00000512813 A0A087WV48 116 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 BCLAF3A2AJT9 711 aaKnown RBP10.73□□□□□ -0.69
CLCN3-208ENST00000512813 CAPN8A6NHC0 703 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 FOXP2O15409 715 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLCN3-208ENST00000512813 GLUD2P49448 558 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 RNASELQ05823 741 aaKnown RBP10.73□□□□□ -0.69
CLCN3-208ENST00000512813 ZNF423Q2M1K9 1284 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 PLK5Q496M5 336 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 RRP12Q5JTH9 1297 aaKnown RBP10.73□□□□□ -0.69
CLCN3-208ENST00000512813 PCNX4Q63HM2 1172 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 GLB1LQ6UWU2 654 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 Q6ZS52 159 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 NLRX1Q86UT6 975 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 RNF168Q8IYW5 571 aaPredicted RBP10.73□□□□□ -0.69
CLCN3-208ENST00000512813 GBP3Q9H0R5 595 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 BRD9Q9H8M2 597 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 EML5Q05BV3 1969 aa10.73□□□□□ -0.69
CLCN3-208ENST00000512813 EFEMP2O95967 443 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 DSG1Q02413 1049 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 CREB5Q02930 508 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 KCNC4Q03721 635 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 UAP1L1Q3KQV9 507 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 PLPPR4Q7Z2D5 763 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 PIP4P1Q86T03 277 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 ELSPBP1Q96BH3 223 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 GPRASP2Q96D09 838 aa10.72□□□□□ -0.69
CLCN3-208ENST00000512813 CDHR1Q96JP9 859 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms