RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 C17orf75Q9HAS0 396 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 STK32BQ9NY57 414 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 TAS2R14Q9NYV8 317 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 EXOC7Q9UPT5 735 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 COQ4Q9Y3A0 265 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 TNS1Q9HBL0 1735 aaKnown RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 ASTN2O75129 1339 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 IGSF9BQ9UPX0 1349 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 COL4A5P29400 1685 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 GOLGA6L10A0A0M3HER8 536 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 FAM187AA6NFU0 413 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 GOLGA6L10A6NI86 522 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 EBAG9O00559 213 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 WNT10BO00744 389 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 MAFGO15525 162 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 RTN2O75298 545 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 ABCB4P21439 1286 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 GPC5P78333 572 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 KRT76Q01546 638 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 DHX34Q14147 1143 aaKnown RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 PALB2Q86YC2 1186 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 FAM71AQ8IYT1 594 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 ARFGAP2Q8N6H7 521 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 ARHGEF26Q96DR7 871 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 RNPC3Q96LT9 517 aaKnown RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 SENP7Q9BQF6 1050 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 RASSF4Q9H2L5 321 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 ZNF277Q9NRM2 450 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 COG5Q9UP83 839 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 SAMM50Q9Y512 469 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 ALG6Q9Y672 507 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 WDR64B1ANS9 1081 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 DAPK3O43293 454 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 CTNND1O60716 968 aaKnown RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 GGPS1O95749 300 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 FTLP02792 175 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 MYZAPP0CAP1 466 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 NR1D1P20393 614 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 MAGEA9P43362 315 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 MXI1P50539 228 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 RPS6P62753 249 aaKnown RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 PGM5Q15124 567 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 UAP1Q16222 522 aaPredicted RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 CEP85LQ5SZL2 805 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 NIM1KQ8IY84 436 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 TMC2Q8TDI7 906 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 SPIRE2Q8WWL2 714 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 TMEM117Q9H0C3 514 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 PLEKHA4Q9H4M7 779 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 PCIF1Q9H4Z3 704 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 NOCTQ9UK39 431 aaKnown RBP9.98□□□□□ -0.81
CPNE4-210ENST00000512332 SYNGAP1Q96PV0 1343 aa9.98□□□□□ -0.81
CPNE4-210ENST00000512332 TTI1O43156 1089 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 LRRN2O75325 713 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ALAS1P13196 640 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 VCAM1P19320 739 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 KCNA3P22001 575 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 GBP1P32455 592 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 GTF2H1P32780 548 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 GCLMP48507 274 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SMTNP53814 917 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SPP2Q13103 211 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TNFAIP1Q13829 316 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 RASA3Q14644 834 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 AGBL2Q5U5Z8 902 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 KCTD16Q68DU8 428 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 DUPD1Q68J44 220 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TMC3Q7Z5M5 1100 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SPATS2Q86XZ4 545 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 MAP4K3Q8IVH8 894 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ARHGEF19Q8IW93 802 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SH2D3CQ8N5H7 860 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 UBL4BQ8N7F7 174 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PLEKHO2Q8TD55 490 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 SHC3Q92529 594 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 FBXL18Q96ME1 805 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TEPSINQ96N21 525 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TAAR1Q96RJ0 339 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 CAMKK2Q96RR4 588 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PDCD2LQ9BRP1 358 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ERP44Q9BS26 406 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PAGR1Q9BTK6 254 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 NEUROG2Q9H2A3 272 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 TISP43B9A030 160 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 BACH1O14867 736 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PPFIA2O75334 1257 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 CTNNA1P35221 906 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 MDH1P40925 334 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 GPC3P51654 580 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 MFAP3P55082 362 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 EIF3BP55884 814 aaKnown RBP9.97□□□□□ -0.81
CPNE4-210ENST00000512332 PEX3P56589 373 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 CXCL9Q07325 125 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 ZNF844Q08AG5 666 aa9.97□□□□□ -0.81
CPNE4-210ENST00000512332 NBPF9Q3BBW0 867 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms