RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GLUD1P00367 558 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 DARSP14868 501 aaKnown RBP10.38□□□□□ -0.75
NUP54-211ENST00000512151 FSHRP23945 695 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 HOXC13P31276 330 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 PHKA2P46019 1235 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 SLC26A2P50443 739 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 LIMK1P53667 647 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 SIM2Q14190 667 aaPredicted RBP10.38□□□□□ -0.75
NUP54-211ENST00000512151 CCDC6Q16204 474 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 ERICH6BQ5W0A0 696 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 UBAC1Q9BSL1 405 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 PRKD2Q9BZL6 878 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 CDH7Q9ULB5 785 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 DSPP15924 2871 aaKnown RBP10.38□□□□□ -0.75
NUP54-211ENST00000512151 HELZ2Q9BYK8 2649 aaKnown RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 GREB1Q4ZG55 1949 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 CYSRT1A8MQ03 144 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 CHURC1-FNTBB4DL54 471 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 BACH1O14867 736 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 GIPC1O14908 333 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 EFEMP2O95967 443 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 SOD2P04179 222 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 ADH1AP07327 375 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 FNTBP49356 437 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 HDAC1Q13547 482 aaPredicted RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 AASDHQ4L235 1098 aaPredicted RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 SOWAHCQ53LP3 525 aaPredicted RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 PDXDC2PQ6P474 469 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 TRMT1LQ7Z2T5 733 aaKnown RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 PALB2Q86YC2 1186 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 LRRC71Q8N4P6 559 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 GATA6Q92908 595 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 PHKBQ93100 1093 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 HERC2P3Q9BVR0 1158 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 CHRDQ9H2X0 955 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 RXFP1Q9HBX9 757 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
NUP54-211ENST00000512151 MARCH5Q9NX47 278 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 AKT3Q9Y243 479 aa10.37□□□□□ -0.75
NUP54-211ENST00000512151 F8W810 466 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 MAFGO15525 162 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 TGM5O43548 720 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 URODP06132 367 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 NT5C2P49902 561 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 GPC3P51654 580 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 NRLP54845 237 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 SATB1Q01826 763 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 RNASELQ05823 741 aaKnown RBP10.36□□□□□ -0.75
NUP54-211ENST00000512151 ADCY1Q08828 1119 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 TROAPQ12815 778 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 STPG1Q5TH74 334 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 B4GALNT3Q6L9W6 998 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 PSAPL1Q6NUJ1 521 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 SWSAP1Q6NVH7 229 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 LILRA6Q6PI73 481 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 GLB1LQ6UWU2 654 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.36□□□□□ -0.75
NUP54-211ENST00000512151 GRASPQ7Z6J2 395 aaPredicted RBP10.36□□□□□ -0.75
NUP54-211ENST00000512151 RNF168Q8IYW5 571 aaPredicted RBP10.36□□□□□ -0.75
NUP54-211ENST00000512151 FAM160A2Q8N612 972 aaPredicted RBP10.36□□□□□ -0.75
NUP54-211ENST00000512151 ITFG1Q8TB96 612 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 FGF13Q92913 245 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 B3GALT6Q96L58 329 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 SDF4Q9BRK5 362 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 LSM14BQ9BX40 385 aaKnown RBP10.36□□□□□ -0.75
NUP54-211ENST00000512151 PLA2G2FQ9BZM2 168 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 ZNF302Q9NR11 478 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 HEBP1Q9NRV9 189 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 PCDHA6Q9UN73 950 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 PCDHA8Q9Y5H6 950 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 NOTCH4Q99466 2003 aa10.36□□□□□ -0.75
NUP54-211ENST00000512151 NRP1O14786 923 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 GAS2O43903 313 aaKnown RBP10.35□□□□□ -0.75
NUP54-211ENST00000512151 PFKPQ01813 784 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 FOXC1Q12948 553 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 GAS6Q14393 721 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 FAM160B1Q5W0V3 765 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 EFCAB12Q6NXP0 572 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 ZNF852Q6ZMS4 543 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 GLYCTKQ8IVS8 523 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 HDAC7Q8WUI4 952 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 NELL2Q99435 816 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 KRT23Q9C075 422 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 RWDD1Q9H446 243 aaPredicted RBP10.35□□□□□ -0.75
NUP54-211ENST00000512151 SMOC1Q9H4F8 434 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 PSTPIP2Q9H939 334 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 ZDHHC7Q9NXF8 308 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 PPP4R2Q9NY27 417 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 DACT1Q9NYF0 836 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 NDRG2Q9UN36 371 aaKnown RBP10.35□□□□□ -0.75
NUP54-211ENST00000512151 FAN1Q9Y2M0 1017 aa10.35□□□□□ -0.75
NUP54-211ENST00000512151 ZFP37Q9Y6Q3 630 aaPredicted RBP10.35□□□□□ -0.75
NUP54-211ENST00000512151 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 NCAM2O15394 837 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 ZMYND10O75800 440 aa10.34□□□□□ -0.75
NUP54-211ENST00000512151 RPL17P18621 184 aaKnown RBP10.34□□□□□ -0.75
NUP54-211ENST00000512151 GLUD2P49448 558 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms