RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 GUCD1Q96NT3 240 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 SAMD11Q96NU1 681 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 CDX2Q99626 313 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 PANK2Q9BZ23 570 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 SCAND2PQ9GZW5 306 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 PRDM12Q9H4Q4 367 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 TMEM134Q9H6X4 195 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 CERS4Q9HA82 394 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 RC3H2Q9HBD1 1191 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 KMT5AQ9NQR1 393 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 PCDHB2Q9Y5E7 798 aa7.89□□□□□ -1.15
PDLIM5-215ENST00000511586 TTC3P53804 2025 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 LOXHD1Q8IVV2 1947 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 A0A087X0B3 334 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 H0YCG3 227 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 SLC16A4O15374 487 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 B4GALT5O43286 388 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 TBCAO75347 108 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 FAM13AO94988 1023 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 PRKCBP05771 671 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 ATF7P17544 494 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 LIG1P18858 919 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 AMPD3Q01432 767 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CACNB1Q02641 598 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 GIT2Q14161 759 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 PAN2Q504Q3 1202 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 NAALADL2Q58DX5 795 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 UBXN11Q5T124 520 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 RESP18Q5W5W9 173 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 ADALQ6DHV7 355 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 SLC27A1Q6PCB7 646 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 GLB1LQ6UWU2 654 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 DYMQ7RTS9 669 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 MRPL10Q7Z7H8 261 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 TMEM192Q8IY95 271 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 HACE1Q8IYU2 909 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 MYCT1Q8N699 235 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 IQUBQ8NA54 791 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 FBXO22Q8NEZ5 403 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 DDX12PQ92771 950 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CLP1Q92989 425 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 DHX58Q96C10 678 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CHAMP1Q96JM3 812 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CASD1Q96PB1 797 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 GAS2L1Q99501 681 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 REEP2Q9BRK0 252 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 PYM1Q9BRP8 204 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 KIFC3Q9BVG8 833 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 TRIM6Q9C030 488 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 LRRC27Q9C0I9 530 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 TMEM117Q9H0C3 514 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CCDC113Q9H0I3 377 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CUEDC2Q9H467 287 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 ZHX3Q9H4I2 956 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 PARVGQ9HBI0 331 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 UBN1Q9NPG3 1134 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 ARHGAP28Q9P2N2 729 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 STXBP5LQ9Y2K9 1186 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 RWDD3Q9Y3V2 267 aa7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 LAMA2P24043 3122 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-215ENST00000511586 CNTNAP2Q9UHC6 1331 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 MYMKA6NI61 221 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 N4BP3O15049 544 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 POLR2DO15514 142 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 OFD1O75665 1012 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 RB1P06400 928 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 ITGA4P13612 1032 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 FOSL2P15408 326 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 SCP2P22307 547 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 IGFBP4P22692 258 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 CMA1P23946 247 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 ABCD1P33897 745 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 CTNNB1P35222 781 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 BMPR1AP36894 532 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 GATMP50440 423 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 ZNF131P52739 623 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 STRN3Q13033 797 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 LONRF3Q496Y0 759 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 EPC2Q52LR7 807 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 CLLU1OSQ5K130 101 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 SPOUT1Q5T280 376 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 ATF7IP2Q5U623 682 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 SPRED2Q7Z698 418 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 TMEM161BQ8NDZ6 487 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 MYLIPQ8WY64 445 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 ADPGKQ9BRR6 497 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 C17orf80Q9BSJ5 609 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 PLVAPQ9BX97 442 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 EIF2AQ9BY44 585 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 MRPL4Q9BYD3 311 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 TNMDQ9H2S6 317 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 AAASQ9NRG9 546 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 RNF19AQ9NV58 838 aa7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 TYW1Q9NV66 732 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-215ENST00000511586 CHMP5Q9NZZ3 219 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms