RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 PODXL2Q9NZ53 605 aa4.51□□□□□ -1.69
SCAMP1-204ENST00000511551 CCDC163A0A0D9SF12 145 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 PIPSLA2A3N6 862 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 CFBP00751 764 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 GAAP10253 952 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 APOBEC3AP31941 199 aaPredicted RBP4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 ELLP55199 621 aaPredicted RBP4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 WNT3AP56704 352 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 MRPL49Q13405 166 aaKnown RBP4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 BEAN1Q3B7T3 259 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 GDF7Q7Z4P5 450 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 UIMC1Q96RL1 719 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 MRPL4Q9BYD3 311 aaKnown RBP4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 TRIM39Q9HCM9 518 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 ING3Q9NXR8 418 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 TRPM5Q9NZQ8 1165 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 SIRPGQ9P1W8 387 aa4.5□□□□□ -1.69
SCAMP1-204ENST00000511551 OPHN1O60890 802 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 KRT37O76014 449 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 NCR1O76036 304 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 STK10O94804 968 aaKnown RBP4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 HKR1P10072 659 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 ADCY2Q08462 1091 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 ADCY1Q08828 1119 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 ERCC6LQ2NKX8 1250 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 EPHA10Q5JZY3 1008 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 GPRIN1Q7Z2K8 1008 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 HDGFL2Q7Z4V5 671 aaPredicted RBP4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 CMTR2Q8IYT2 770 aaKnown RBP4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 UNC5BQ8IZJ1 945 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 JMYQ8N9B5 988 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 ANKS1AQ92625 1134 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 MTG2Q9H4K7 406 aa4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
SCAMP1-204ENST00000511551 DIRC3C9JPN6 131 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 M0R2C6 588 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 ALDH1A2O94788 518 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 NDUFA10O95299 355 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 PTX3P26022 381 aaPredicted RBP4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 BLOC1S1P78537 153 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 MICALCLQ6ZW33 695 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 KIAA1958Q8N8K9 716 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 CAVIN3Q969G5 261 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 CLCA2Q9UQC9 943 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 FRMD4BQ9Y2L6 1034 aa4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 TNPO3Q9Y5L0 923 aaKnown RBP4.48□□□□□ -1.69
SCAMP1-204ENST00000511551 CCDC85CA6NKD9 419 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PROB1E7EW31 1015 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 LEFTY2O00292 366 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PRPF6O94906 941 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 ESRRBO95718 433 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 CASRP41180 1078 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PTH2RP49190 550 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 ZNF362Q5T0B9 420 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 ABHD17BQ5VST6 288 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 KIAA1841Q6NSI8 718 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 TIGD7Q6NT04 549 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 ZCCHC8Q6NZY4 707 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 DRICH1Q6PGQ1 229 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 DDX53Q86TM3 631 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PLXDC1Q8IUK5 500 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PHYKPLQ8IUZ5 450 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 CHST14Q8NCH0 376 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PIK3C3Q8NEB9 887 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 OR5M3Q8NGP4 307 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 SLC9A6Q92581 669 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 IL17RAQ96F46 866 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PCIF1Q9H4Z3 704 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 RSAD1Q9HA92 442 aa4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 COL3A1P02461 1466 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 SETD1BQ9UPS6 1966 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-204ENST00000511551 PTPDC1A2A3K4 754 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 B4E1Z4 1266 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 H7C1D1 291 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 GLRX3O76003 335 aaKnown RBP4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 C1RP00736 705 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 CXCR5P32302 372 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 MPLP40238 635 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 GZMKP49863 264 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 GUCY1B3Q02153 619 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 NHLH1Q02575 133 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 FOXF2Q12947 444 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 ZNF174Q15697 407 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 SYT12Q8IV01 421 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 HIST1H2AHQ96KK5 128 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 HIST1H2AJQ99878 128 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 NOL10Q9BSC4 688 aaKnown RBP4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 EPC1Q9H2F5 836 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 HDAC5Q9UQL6 1122 aa4.46□□□□□ -1.7
SCAMP1-204ENST00000511551 EGR2P11161 476 aaPredicted RBP4.45□□□□□ -1.7
SCAMP1-204ENST00000511551 CD69Q07108 199 aa4.45□□□□□ -1.7
SCAMP1-204ENST00000511551 RASA3Q14644 834 aa4.45□□□□□ -1.7
SCAMP1-204ENST00000511551 ESRP1Q6NXG1 681 aaKnown RBP4.45□□□□□ -1.7
SCAMP1-204ENST00000511551 BTNL9Q6UXG8 535 aa4.45□□□□□ -1.7
SCAMP1-204ENST00000511551 CPEB3Q8NE35 698 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms