RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, human

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUB1-208	ENST00000511175	FAM221B	A6H8Z2	402 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	KCNQ2	O43526	872 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	CDK4	P11802	303 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	ADCY2	Q08462	1091 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	ARHGAP44	Q17R89	818 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	PRR16	Q569H4	304 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	KANSL1	Q7Z3B3	1105 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	XYLT1	Q86Y38	959 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	KIAA1958	Q8N8K9	716 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	FAM98A	Q8NCA5	519 aa	Known RBP	4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	LINC00476	Q8WZB0	136 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	OSBPL6	Q9BZF3	934 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	PCIF1	Q9H4Z3	704 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	TES	Q9UGI8	421 aa	Known RBP	4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	SYNPO2	Q9UMS6	1093 aa		4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	TNPO3	Q9Y5L0	923 aa	Known RBP	4.38	□□□□□ -1.71
SUB1-208	ENST00000511175	PTPDC1	A2A3K4	754 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	UNC119B	A6NIH7	251 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	RNASET2	O00584	256 aa	Known RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	ALDH1A2	O94788	518 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	APOL3	O95236	402 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	SEC24C	P53992	1094 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	RNASE9	P60153	205 aa	Known RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	EPHA7	Q15375	998 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	METTL24	Q5JXM2	366 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	SP5	Q6BEB4	398 aa	Predicted RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	ESRP1	Q6NXG1	681 aa	Known RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	GDF7	Q7Z4P5	450 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	FAM83A	Q86UY5	434 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	SYT12	Q8IV01	421 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	CHST14	Q8NCH0	376 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	SIMC1	Q8NDZ2	872 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	OR5M3	Q8NGP4	307 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	CAVIN3	Q969G5	261 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	PDCD2L	Q9BRP1	358 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	NOL10	Q9BSC4	688 aa	Known RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	MYL10	Q9BUA6	226 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	ALG13	Q9NP73	1137 aa	Known RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	SAMD15	Q9P1V8	674 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	CHST2	Q9Y4C5	530 aa		4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.37	□□□□□ -1.71
SUB1-208	ENST00000511175	OPHN1	O60890	802 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	PRPF6	O94906	941 aa	Known RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	FSBP	O95073	299 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	CYP17A1	P05093	508 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	SLC9A1	P19634	815 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	CD69	Q07108	199 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	MRPL49	Q13405	166 aa	Known RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	RASA3	Q14644	834 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	BEAN1	Q3B7T3	259 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	EPHA10	Q5JZY3	1008 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	IQSEC1	Q6DN90	963 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	BOLL	Q8N9W6	283 aa	Known RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	MRPL4	Q9BYD3	311 aa	Known RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	POFUT1	Q9H488	388 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	SIRPG	Q9P1W8	387 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	INSL6	Q9Y581	213 aa		4.36	□□□□□ -1.71
SUB1-208	ENST00000511175	ZSCAN20	P17040	1043 aa	Predicted RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	ITGB6	P18564	788 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	CXCR5	P32302	372 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	MAN2A1	Q16706	1144 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	DDX53	Q86TM3	631 aa	Known RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	PPP1R14C	Q8TAE6	165 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	RTF1	Q92541	710 aa	Known RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	IL17RA	Q96F46	866 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	COQ10A	Q96MF6	247 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	DCLRE1C	Q96SD1	692 aa	Known RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	ELF4	Q99607	663 aa	Predicted RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	ADAM2	Q99965	735 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	LRFN3	Q9BTN0	628 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	INTS7	Q9NVH2	962 aa	Known RBP	4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	HDAC5	Q9UQL6	1122 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	FRMD4B	Q9Y2L6	1034 aa		4.35	□□□□□ -1.71
SUB1-208	ENST00000511175	PIPSL	A2A3N6	862 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175		H7C1D1	291 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	NRP1	O14786	923 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	HKR1	P10072	659 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	AVPR1B	P47901	424 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	NHLH2	Q02577	135 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	TP53BP2	Q13625	1128 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	ZNF174	Q15697	407 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	PDCD4	Q53EL6	469 aa	Known RBP	4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	KIAA1841	Q6NSI8	718 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	BTNL9	Q6UXG8	535 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	DOK3	Q7L591	496 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	GPRIN1	Q7Z2K8	1008 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	NME9	Q86XW9	330 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	CPEB3	Q8NE35	698 aa	Known RBP	4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	ASB10	Q8WXI3	467 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	CLUHP3	Q96NS8	147 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	DNAJC7	Q99615	494 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	MAP3K2	Q9Y2U5	619 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	SALL3	Q9BXA9	1300 aa		4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	SETD1B	Q9UPS6	1966 aa	Known RBP	4.34	□□□□□ -1.71
SUB1-208	ENST00000511175	GAGE12B	A1L429	117 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms