RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 MAPTP10636 758 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 ERCC5P28715 1186 aaPredicted RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 ADSSP30520 456 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 TNFSF9P41273 254 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ARID5BQ14865 1188 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 KRT31Q15323 416 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 MAPK6Q16659 721 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 SLC39A4Q6P5W5 647 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 FBXO46Q6PJ61 603 aaPredicted RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 CATSPER4Q7RTX7 472 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ZBTB8OSQ8IWT0 167 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 TMEM192Q8IY95 271 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 KATNAL1Q9BW62 490 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 GTF2IRD1Q9UHL9 959 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ZMYM2Q9UBW7 1377 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 UMODL1Q5DID0 1318 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 DLG4P78352 724 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 LRMPQ12912 555 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 ENOX2Q16206 610 aaKnown RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 SCARA3Q6AZY7 606 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 CCSAPQ6IQ19 270 aaPredicted RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 EPM2AIP1Q7L775 607 aaPredicted RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 TCP11Q8WWU5 503 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 HAPLN2Q9GZV7 340 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 TOPORSQ9NS56 1045 aaPredicted RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 Q9Y3F1 56 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 BICDL2A1A5D9 508 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 RRN3P2A6NIE6 340 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 HAS3O00219 553 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 CETN3O15182 167 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 MAGEB2O15479 319 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 ERLIN2O94905 339 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 NAMPTP43490 491 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 GPC3P51654 580 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 PRPF4BQ13523 1007 aaKnown RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 MXD4Q14582 209 aaPredicted RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 STXBP4Q6ZWJ1 553 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 TMC6Q7Z403 805 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 SCLYQ96I15 445 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
SMAD1-209ENST00000511125 HSPBP1Q9NZL4 362 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 KLK14Q9P0G3 267 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 CDY2AQ9Y6F7 541 aa8.82□□□□□ -1
SMAD1-209ENST00000511125 IGKV6-21A0A0C4DH24 114 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 SLC26A4O43511 780 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 CALUO43852 315 aaPredicted RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 NCKAP1LP55160 1127 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 UBXN1Q04323 297 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 PPP2R5AQ15172 486 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 TCP11X2Q5H9J9 407 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 TUBGCP2Q9BSJ2 902 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 CXCL16Q9H2A7 254 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 SEL1LQ9UBV2 794 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 PIN4Q9Y237 131 aaKnown RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 HOXD8P13378 290 aaPredicted RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 PRMT2P55345 433 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 GTF2BQ00403 316 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 TFDP1Q14186 410 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 ZNF618Q5T7W0 954 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 DEFB128Q7Z7B8 93 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 RABGGTAQ92696 567 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 ZNF333Q96JL9 665 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 MSTO1Q9BUK6 570 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 UPF3AQ9H1J1 476 aaKnown RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 PAK6Q9NQU5 681 aaPredicted RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 ARHGAP28Q9P2N2 729 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 CLDN3O15551 220 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 SGPL1O95470 568 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 GNAT1P11488 350 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 AKAP5P24588 427 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 PHKA2P46019 1235 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 WNT7BP56706 349 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 ZNF568Q3ZCX4 644 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 LRRC55Q6ZSA7 311 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 FAM186BQ8IYM0 893 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 CTAGE1Q96RT6 745 aa8.81□□□□□ -1
SMAD1-209ENST00000511125 NOC2LQ9Y3T9 749 aaKnown RBP8.81□□□□□ -1
SMAD1-209ENST00000511125 IKBKBO14920 756 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 MSCO60682 206 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 KIF20AO95235 890 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 CHRNA1P02708 482 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 ARF4P18085 180 aaPredicted RBP8.8□□□□□ -1
SMAD1-209ENST00000511125 CD52P31358 61 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 GCLMP48507 274 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 ZNF75DP51815 510 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 COPB1P53618 953 aaKnown RBP8.8□□□□□ -1
SMAD1-209ENST00000511125 PTENP60484 403 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 MBTD1Q05BQ5 628 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 TRIM60Q495X7 471 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 GLRA4Q5JXX5 417 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 ATF7IP2Q5U623 682 aa8.8□□□□□ -1
SMAD1-209ENST00000511125 JPH2Q9BR39 696 aaPredicted RBP8.8□□□□□ -1
SMAD1-209ENST00000511125 EIF2AQ9BY44 585 aaKnown RBP8.8□□□□□ -1
SMAD1-209ENST00000511125 AGO3Q9H9G7 860 aaKnown RBP8.8□□□□□ -1
SMAD1-209ENST00000511125 PDE11AQ9HCR9 933 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms