RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SWSAP1Q6NVH7 229 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ANKRD54Q6NXT1 300 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MAMSTRQ6ZN01 415 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 RASGRP2Q7LDG7 609 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 NEK8Q86SG6 692 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 VPS52Q8N1B4 723 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 EFCAB3Q8N7B9 438 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 KREMEN2Q8NCW0 462 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ANKRD20A12PQ8NF67 263 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CEP76Q8TAP6 659 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 C2orf15Q8WU43 125 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 GLMNQ92990 594 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 NLRP4Q96MN2 994 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZNF396Q96N95 335 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PIGSQ96S52 555 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 CEP89Q96ST8 783 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 TRMT61BQ9BVS5 477 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SLC26A6Q9BXS9 759 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MRPL4Q9BYD3 311 aaKnown RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 MIS12Q9H081 205 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 ZHX3Q9H4I2 956 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 KIAA1586Q9HCI6 787 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 EPB41L4AQ9HCS5 686 aaPredicted RBP3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SEPT3Q9UH03 358 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 STRIP2Q9ULQ0 834 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 SIT1Q9Y3P8 196 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHGA2Q9Y5H1 932 aa3.13□□□□□ -1.91
CLOCK-209ENST00000511124 DDX39AO00148 427 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 KLHL41O60662 606 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RNASEH1O60930 286 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PRPF40AO75400 957 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 THP07101 528 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SRGAP2CP0DJJ0 459 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 UBA1P22314 1058 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PSEN1P49768 467 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RABGGTBP53611 331 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PSMD2Q13200 908 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PDAP1Q13442 181 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 TRPC3Q13507 836 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 FBXO47Q5MNV8 452 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 WDR45BQ5MNZ6 344 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 DDX53Q86TM3 631 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 COLGALT1Q8NBJ5 622 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GUCD1Q96NT3 240 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 INPP4AQ96PE3 977 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 XPO6Q96QU8 1125 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PUS7LQ9H0K6 701 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ADAM7Q9H2U9 754 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ANTXR1Q9H6X2 564 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 WDR6Q9NNW5 1121 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ZSCAN32Q9NX65 697 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GDE1Q9NZC3 331 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 TBC1D7Q9P0N9 293 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 TBC1D14Q9P2M4 693 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GABBR1Q9UBS5 961 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SLC12A6Q9UHW9 1150 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PADI3Q9ULW8 664 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 HEMK1Q9Y5R4 338 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 POLR2AP24928 1970 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SSC5DA1L4H1 1573 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SIPA1L3O60292 1781 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 H3BQ06 376 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 K7ERI5 159 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SMARCA5O60264 1052 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 LILRB3O75022 631 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 NFATC1O95644 943 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PFKLP17858 780 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GBP1P32455 592 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 MAN1A1P33908 653 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CXCL12P48061 93 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PPP3CCP48454 512 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 LIG4P49917 911 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 HSD17B4P51659 736 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PPP2R3AQ06190 1150 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 POU5F1BQ06416 359 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 MOGSQ13724 837 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 BECN1Q14457 450 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PTPN14Q15678 1187 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 GRIK5Q16478 980 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 L1TD1Q5T7N2 865 aaKnown RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 MCTP1Q6DN14 999 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 CEP57Q86XR8 500 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 NT5DC4Q86YG4 428 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ARHGAP18Q8N392 663 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 DTWD2Q8NBA8 298 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ATL2Q8NHH9 583 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RASGRP4Q8TDF6 673 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 SCFD1Q8WVM8 642 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 LRRC45Q96CN5 670 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 FAM212AQ96EL1 285 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 FNBP1Q96RU3 617 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 MKNK1Q9BUB5 465 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 RHOBTB2Q9BYZ6 727 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ZDHHC4Q9NPG8 344 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHA12Q9UN75 941 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 NCKAP1Q9Y2A7 1128 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 USP15Q9Y4E8 981 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 PAXBP1Q9Y5B6 917 aa3.12□□□□□ -1.91
CLOCK-209ENST00000511124 V9GY48 417 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-209ENST00000511124 ENPP3O14638 875 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms