RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 GPBP1Q86WP2 473 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 KRI1Q8N9T8 703 aaKnown RBP15.44■□□□□ 0.06
DDX41-212ENST00000511040 LINC00301Q8NCQ3 95 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 TRAIPQ9BWF2 469 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 APOL6Q9BWW8 343 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 CCSER1Q9C0I3 900 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 C2orf40Q9H1Z8 148 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 ALG13Q9NP73 1137 aaKnown RBP15.44■□□□□ 0.06
DDX41-212ENST00000511040 RWDD3Q9Y3V2 267 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 HES2Q9Y543 173 aa15.44■□□□□ 0.06
DDX41-212ENST00000511040 PRRC2BQ5JSZ5 2229 aaKnown RBP15.44■□□□□ 0.06
DDX41-212ENST00000511040 C5orf67F2Z3F1 127 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 ZNF623O75123 536 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 NPTXRO95502 500 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 EDN1P05305 212 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 PRKCBP05771 671 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 AXLP30530 894 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 PBX3P40426 434 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 NPTX2P47972 431 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 PCBP1Q15365 356 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDX41-212ENST00000511040 MAPK6Q16659 721 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 ARSHQ5FYA8 562 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 KLHL23Q8NBE8 558 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 SMG8Q8ND04 991 aaKnown RBP15.43■□□□□ 0.06
DDX41-212ENST00000511040 RAD54LQ92698 747 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 CHAMP1Q96JM3 812 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 DRC1Q96MC2 740 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 C11orf84Q9BUA3 381 aaPredicted RBP15.43■□□□□ 0.06
DDX41-212ENST00000511040 PANK2Q9BZ23 570 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 CCDC113Q9H0I3 377 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 FZD8Q9H461 694 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 CWH43Q9H720 699 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 PRMT7Q9NVM4 692 aaPredicted RBP15.43■□□□□ 0.06
DDX41-212ENST00000511040 EYSQ5T1H1 3165 aa15.43■□□□□ 0.06
DDX41-212ENST00000511040 SPTLC2O15270 562 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 SLC16A4O15374 487 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 OFD1O75665 1012 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 ITGB1P05556 798 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 RB1P06400 928 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 PDIA4P13667 645 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 POU3F3P20264 500 aaPredicted RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 DMP1Q13316 513 aaPredicted RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 PRPF4BQ13523 1007 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 BECN1Q14457 450 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 SKIV2LQ15477 1246 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 GLB1LQ6UWU2 654 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 PPP4R3CPQ6ZMV5 832 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 AGMOQ6ZNB7 445 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 MRPL10Q7Z7H8 261 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 COLGALT1Q8NBJ5 622 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 PGBD4Q96DM1 585 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 MRPL38Q96DV4 380 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 CCDC51Q96ER9 411 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 PLVAPQ9BX97 442 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 NXF3Q9H4D5 531 aaKnown RBP15.42■□□□□ 0.06
DDX41-212ENST00000511040 KMT5AQ9NQR1 393 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 IPPQ9Y573 584 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 PCDHB12Q9Y5F1 795 aa15.42■□□□□ 0.06
DDX41-212ENST00000511040 KRT18P05783 430 aaKnown RBP15.41■□□□□ 0.06
DDX41-212ENST00000511040 ITGA4P13612 1032 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 NCLP19338 710 aaKnown RBP15.41■□□□□ 0.06
DDX41-212ENST00000511040 DNAJB1P25685 340 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 TXLNAP40222 546 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 AFF1P51825 1210 aaKnown RBP15.41■□□□□ 0.06
DDX41-212ENST00000511040 PTPROQ16827 1216 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 FAM187BQ17R55 369 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 NOMO2Q5JPE7 1267 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 NT5DC1Q5TFE4 455 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 RRAGBQ5VZM2 374 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 EEF1DP3Q658K8 133 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 THNSL1Q8IYQ7 743 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 KCTD17Q8N5Z5 321 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 SLC17A8Q8NDX2 589 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 TIPINQ9BVW5 301 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 TRIM6Q9C030 488 aaPredicted RBP15.41■□□□□ 0.06
DDX41-212ENST00000511040 PDZD7Q9H5P4 517 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 AAASQ9NRG9 546 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 CCDC39Q9UFE4 941 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 MORC2Q9Y6X9 1032 aaPredicted RBP15.41■□□□□ 0.06
DDX41-212ENST00000511040 TRANK1O15050 2925 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 CNTNAP2Q9UHC6 1331 aa15.41■□□□□ 0.06
DDX41-212ENST00000511040 A0A087X0B3 334 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 A0A1B0GUA9 196 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 K7ERI5 159 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 ACKR2O00590 384 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 YEATS4O95619 227 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 BRD1O95696 1058 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 PLS3P13797 630 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 LAG3P18627 525 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 EFNA5P52803 228 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 SLC27A1Q6PCB7 646 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 SPPL3Q8TCT6 385 aa15.4■□□□□ 0.06
DDX41-212ENST00000511040 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
DDX41-212ENST00000511040 PRIMPOLQ96LW4 560 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms