RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 POLR3FQ9H1D9 316 aaPredicted RBP13.39□□□□□ -0.27
CHFR-208ENST00000511001 TLE6Q9H808 572 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 GPRC5CQ9NQ84 441 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 CD207Q9UJ71 328 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
CHFR-208ENST00000511001 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 C5orf42Q9H799 3197 aa13.39□□□□□ -0.27
CHFR-208ENST00000511001 HIDE1A8MVS5 230 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 EYA4O95677 639 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 GALTP07902 379 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 AXLP30530 894 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 NDUFV1P49821 464 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 ZP2Q05996 745 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 TFDP1Q14186 410 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 SMAD2Q15796 467 aaKnown RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 GLB1LQ6UWU2 654 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 GJD3Q8N144 294 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 BCL7CQ8WUZ0 217 aaPredicted RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 PGBD4Q96DM1 585 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 CPB2Q96IY4 423 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 NACC1Q96RE7 527 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 EIF2AQ9BY44 585 aaKnown RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 NFKBIZQ9BYH8 718 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 C11orf16Q9NQ32 467 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 BARX2Q9UMQ3 279 aaPredicted RBP13.38□□□□□ -0.27
CHFR-208ENST00000511001 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
CHFR-208ENST00000511001 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 ZC3H11AO75152 810 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHFR-208ENST00000511001 DDHD2O94830 711 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 ERLIN2O94905 339 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 ARF4P18085 180 aaPredicted RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 MUTP22033 750 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 GJB2P29033 226 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 COASYQ13057 564 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 PTGDRQ13258 359 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 PCBP1Q15365 356 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHFR-208ENST00000511001 IL17AQ16552 155 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 ZNF280BQ86YH2 543 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 IGSF22Q8N9C0 903 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 CCDC51Q96ER9 411 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 CCDC43Q96MW1 224 aaKnown RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 CDCA3Q99618 268 aaPredicted RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 CSRNP2Q9H175 543 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 RSAD1Q9HA92 442 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 NGRNQ9NPE2 291 aaKnown RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 ENTPD7Q9NQZ7 604 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 PRKAG3Q9UGI9 489 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 ARIH1Q9Y4X5 557 aaPredicted RBP13.37□□□□□ -0.27
CHFR-208ENST00000511001 IPPQ9Y573 584 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
CHFR-208ENST00000511001 INPPL1O15357 1258 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 B4GALT5O43286 388 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 CYP11B2P19099 503 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
CHFR-208ENST00000511001 SLC11A1P49279 550 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 ALDH7A1P49419 539 aaKnown RBP13.36□□□□□ -0.27
CHFR-208ENST00000511001 KRT17Q04695 432 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 CDCA2Q69YH5 1023 aaPredicted RBP13.36□□□□□ -0.27
CHFR-208ENST00000511001 NOTUMQ6P988 496 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 ADHFE1Q8IWW8 467 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 SMRP1Q8NCR6 262 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 CNNM3Q8NE01 707 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 IGSF21Q96ID5 467 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 VN1R3Q9BXE9 311 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 UPF2Q9HAU5 1272 aaKnown RBP13.36□□□□□ -0.27
CHFR-208ENST00000511001 MIOSQ9NXC5 875 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 FAM50BQ9Y247 325 aa13.36□□□□□ -0.27
CHFR-208ENST00000511001 MYO10Q9HD67 2058 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 LRRIQ4A6NIV6 560 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 PI4K2BG5E9Z4 385 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 EDN1P05305 212 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 ITGA4P13612 1032 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 PRPHP41219 470 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 MCM2P49736 904 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 PDIA5Q14554 519 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
CHFR-208ENST00000511001 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms