RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 PPME1Q9Y570 386 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
LIN54-210ENST00000510877 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 CETN2P41208 172 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 FAM171A1Q5VUB5 890 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 OXER1Q8TDS5 423 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.54□□□□□ -0.241e-7■■■■□ 24.9
LIN54-210ENST00000510877 CYP4F11Q9HBI6 524 aa13.54□□□□□ -0.24
LIN54-210ENST00000510877 E9PMD0 336 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 CAND2O75155 1236 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 CD4P01730 458 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 AXLP30530 894 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 CIITAP33076 1130 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 HSD17B4P51659 736 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 CREMQ03060 361 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 ZNF397Q8NF99 534 aaPredicted RBP13.53□□□□□ -0.24
LIN54-210ENST00000510877 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 SLC8A2Q9UPR5 921 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 MAPK8IP1Q9UQF2 711 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 DDIT3P35638 169 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 DNM1Q05193 864 aaKnown RBP13.53□□□□□ -0.24
LIN54-210ENST00000510877 MCM6Q14566 821 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 GDF6Q6KF10 455 aaPredicted RBP13.53□□□□□ -0.24
LIN54-210ENST00000510877 CSGALNACT1Q8TDX6 532 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
LIN54-210ENST00000510877 TIPINQ9BVW5 301 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 TMEM117Q9H0C3 514 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 NCAM2O15394 837 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 ADCY6O43306 1168 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 KPNA1P52294 538 aaPredicted RBP13.53□□□□□ -0.24
LIN54-210ENST00000510877 KLHL40Q2TBA0 621 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 ZNF280DQ6N043 979 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 SECISBP2LQ93073 1101 aaKnown RBP13.53□□□□□ -0.24
LIN54-210ENST00000510877 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
LIN54-210ENST00000510877 GPC3P51654 580 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 PTPAQ15257 358 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 PDXDC1Q6P996 788 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.24
LIN54-210ENST00000510877 LRRC4Q9HBW1 653 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.24
LIN54-210ENST00000510877 GOLGA6L10A6NI86 522 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 PITPNM1O00562 1244 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 GLUD1P00367 558 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 CKBP12277 381 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 MYL4P12829 197 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 CFAP58Q5T655 872 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 ARL6IP4Q66PJ3 421 aaKnown RBP13.52□□□□□ -0.24
LIN54-210ENST00000510877 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 SPATA2LQ8IUW3 424 aaPredicted RBP13.52□□□□□ -0.24
LIN54-210ENST00000510877 CLEC4DQ8WXI8 215 aa13.52□□□□□ -0.24
LIN54-210ENST00000510877 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 IQCF3P0C7M6 154 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 PIK3CAP42336 1068 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 GLRA4Q5JXX5 417 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 USP25Q9UHP3 1055 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 PIK3CDO00329 1044 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 HIP1RO75146 1068 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 EPHB3P54753 998 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 HLA-CQ95604 372 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 STK39Q9UEW8 545 aa13.52□□□□□ -0.25
LIN54-210ENST00000510877 MRPS23Q9Y3D9 190 aaKnown RBP13.52□□□□□ -0.25
LIN54-210ENST00000510877 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 NT5C1B-RDH14C9J2C7 533 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 EYA4O95677 639 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 TNNT1P13805 278 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 ATXN3P54252 364 aaPredicted RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 TTC31Q49AM3 519 aaPredicted RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 GAD1Q99259 594 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 TCF25Q9BQ70 676 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 KIAA1586Q9HCI6 787 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 PAK6Q9NQU5 681 aaPredicted RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 LAMTOR4Q0VGL1 99 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 PDLIM7Q9NR12 457 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 NFASCO94856 1347 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 ARHGAP1Q07960 439 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 CENPHQ9H3R5 247 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 THG1LQ9NWX6 298 aaKnown RBP13.51□□□□□ -0.25
LIN54-210ENST00000510877 DUOX1Q9NRD9 1551 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 A0A1B0GVL5 298 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 GOLGA8IPA6NC78 632 aa13.51□□□□□ -0.25
LIN54-210ENST00000510877 GOLGA8JA6NMD2 632 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms