RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 DKK1O94907 266 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 EPN2O95208 641 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 SLURP2P0DP57 97 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 PCNAP12004 261 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 USP11P51784 963 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 CCNHP51946 323 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 AK2P54819 239 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 GSCP56915 257 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 IL1RL1Q01638 556 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 PDIA5Q14554 519 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 ODF1Q14990 250 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 Q6ZUG5 572 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 CDAN1Q8IWY9 1227 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 EFCAB13Q8IY85 973 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 RASSF8Q8NHQ8 419 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 ASB2Q96Q27 587 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 ZNF287Q9HBT7 754 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 GGA3Q9NZ52 723 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 AK5Q9Y6K8 562 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 LAMB1P07942 1786 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 MYH1P12882 1939 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 ZBBXA8MT70 800 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 ZBTB14O43829 449 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 HSD17B2P37059 387 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 DEUP1Q05D60 604 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 PPP1R7Q15435 360 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 FAM47AQ5JRC9 791 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 USP50Q70EL3 339 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 VSIG1Q86XK7 387 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 APOBEC3FQ8IUX4 373 aaKnown RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 FOXP4Q8IVH2 680 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 CRACR2BQ8N4Y2 399 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 THAP3Q8WTV1 239 aaPredicted RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 DEFB129Q9H1M3 183 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 ANLNQ9NQW6 1124 aa10.53□□□□□ -0.72
USP53-207ENST00000510852 DDX18Q9NVP1 670 aaKnown RBP10.53□□□□□ -0.72
USP53-207ENST00000510852 WDR19Q8NEZ3 1342 aa10.52□□□□□ -0.72
USP53-207ENST00000510852 ZSCAN9O15535 394 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 FAM13AO94988 1023 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 HSPA4LO95757 839 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 STAT1P42224 750 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 TOB2Q14106 344 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 BECN1Q14457 450 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 LBRQ14739 615 aaKnown RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 PERM1Q5SV97 790 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 KAZNQ674X7 775 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 CXorf57Q6NSI4 855 aaKnown RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 CCDC84Q86UT8 332 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 ZNF444Q8N0Y2 327 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 CBARPQ8N350 705 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 HDAC2Q92769 488 aaKnown RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 TAF1DQ9H5J8 278 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 TRPV4Q9HBA0 871 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 SLC5A4Q9NY91 659 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 PRKAG3Q9UGI9 489 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 STMN1P16949 149 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 MPSTP25325 297 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 SHMT1P34896 483 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 ADH7P40394 386 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 PEX5P50542 639 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 ALDH5A1P51649 535 aaPredicted RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 SMTNP53814 917 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 RWDD2BP57060 319 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 RCN1Q15293 331 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 INAQ16352 499 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 SLC5A9Q2M3M2 681 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 FATE1Q969F0 183 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 TEPSINQ96N21 525 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 ZKSCAN3Q9BRR0 538 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 COG5Q9UP83 839 aa10.52□□□□□ -0.73
USP53-207ENST00000510852 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
USP53-207ENST00000510852 BRINP1O60477 761 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 PRLRP16471 622 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 NT5C2P49902 561 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 TFAP4Q01664 338 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 BNIP1Q12981 228 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 GBX1Q14549 363 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 MMEL1Q495T6 779 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 FBXL16Q8N461 479 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 PPM1NQ8N819 430 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 BRF1Q92994 677 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 ADPGKQ9BRR6 497 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 CRACR2AQ9BSW2 395 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 AGXT2Q9BYV1 514 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 VPS37BQ9H9H4 285 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 OSGEPQ9NPF4 335 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 FRMPD2Q68DX3 1309 aaPredicted RBP10.51□□□□□ -0.73
USP53-207ENST00000510852 PITPNM2Q9BZ72 1349 aa10.51□□□□□ -0.73
USP53-207ENST00000510852 SH2B2O14492 632 aaPredicted RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 IFIT3O14879 490 aaKnown RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 POLR3GO15318 223 aaPredicted RBP10.5□□□□□ -0.73
USP53-207ENST00000510852 DKC1O60832 514 aaKnown RBP eCLIP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms