RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 STIM2Q9P246 746 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 PCDHGC5Q9Y5F6 944 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 BZW2Q9Y6E2 419 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 POTEFA5A3E0 1075 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 CES2O00748 559 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 PDXKO00764 312 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 SLC16A3O15427 465 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 CALUO43852 315 aaPredicted RBP17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 SLITRK3O94933 977 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TXNP10599 105 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 GIT2Q14161 759 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 CTTNQ14247 550 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 KNOP1Q1ED39 458 aaKnown RBP17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 OLFML2BQ68BL8 750 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TAPT1Q6NXT6 567 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 CCDC62Q6P9F0 684 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 POTEGQ6S5H5 508 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TPH2Q8IWU9 490 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 CAVIN3Q969G5 261 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 LRRC1Q9BTT6 524 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 KATNBL1Q9H079 304 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TUFT1Q9NNX1 390 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 GABRQQ9UN88 632 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 GOLGA6BA6NDN3 693 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 GGPS1O95749 300 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 NR2F2P24468 414 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 FLT3LGP49771 235 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 CAP1Q01518 475 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 MAP2K1Q02750 393 aaPredicted RBP17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 PRKCZQ05513 592 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 KLHL30Q0D2K2 578 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 KCNH2Q12809 1159 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 ACVR2BQ13705 512 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 RAPGEF1Q13905 1077 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 RDM1Q8NG50 284 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 CD99L2Q8TCZ2 262 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 NEK9Q8TD19 979 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 TSPYL1Q9H0U9 437 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 METTL14Q9HCE5 456 aaKnown RBP17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 FBXL5Q9UKA1 691 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 PCDHA10Q9Y5I2 948 aa17.46■□□□□ 0.39
SQSTM1-213ENST00000510187 MGAMO43451 1857 aa17.46■□□□□ 0.38
SQSTM1-213ENST00000510187 ZMYND10O75800 440 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 AFPP02771 609 aaKnown RBP17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 P4HBP07237 508 aaKnown RBP17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 XRCC5P13010 732 aaKnown RBP17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 ACTR2P61160 394 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 C8orf74Q6P047 294 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 METTL7BQ6UX53 244 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 LXNQ9BS40 222 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 BEGAINQ9BUH8 593 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 ARMCX3Q9UH62 379 aaPredicted RBP17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 TELO2Q9Y4R8 837 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 ZSWIM8A7E2V4 1837 aa17.45■□□□□ 0.38
SQSTM1-213ENST00000510187 RBM47A0AV96 593 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 GAP43P17677 238 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 GGCXP38435 758 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 ADCYAP1R1P41586 468 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 CELF3Q5SZQ8 465 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 MEI1Q5TIA1 1274 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 ALS2CLQ60I27 953 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 TYW1Q9NV66 732 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 DMGDHQ9UI17 866 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 GOLGA8KD6RF30 607 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 AGPSO00116 658 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 NCK2O43639 380 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 BUB1O43683 1085 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 PHACTR2O75167 634 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 PALMO75781 387 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 PSAPP07602 524 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 MUTP22033 750 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 RPL13P26373 211 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 HOXD10P28358 340 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 QARSP47897 775 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 NAP1L1P55209 391 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 IFI16Q16666 785 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 PRAMEF19Q5SWL8 479 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 TMEM63BQ5T3F8 832 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 DPY19L2P1Q6NXN4 242 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 MIS18BP1Q6P0N0 1132 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 SND1Q7KZF4 910 aaKnown RBP eCLIP17.44■□□□□ 0.381e-6■□□□□ 8.1
SQSTM1-213ENST00000510187 SFR1Q86XK3 245 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 GSPT2Q8IYD1 628 aaKnown RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 COPS5Q92905 334 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 SH3GL2Q99962 352 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 REEP2Q9BRK0 252 aa17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
SQSTM1-213ENST00000510187 OPA1O60313 960 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 FKTNO75072 461 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 EYA4O95677 639 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 PRKCIP41743 596 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 PSMC6P62333 389 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 NFIL3Q16649 462 aa17.43■□□□□ 0.38
SQSTM1-213ENST00000510187 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms