RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 RDM1Q8NG50 284 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 FEZF2Q8TBJ5 459 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 CRYGNQ8WXF5 182 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 RUBCNQ92622 972 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 NIFKQ9BYG3 293 aaKnown RBP11.61□□□□□ -0.55
MBD4-208ENST00000509828 WDR6Q9NNW5 1121 aaKnown RBP11.61□□□□□ -0.55
MBD4-208ENST00000509828 CLUHO75153 1309 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 MED19A0JLT2 244 aaPredicted RBP11.6□□□□□ -0.55
MBD4-208ENST00000509828 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 TMEM150BA6NC51 233 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 TEX28O15482 410 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
MBD4-208ENST00000509828 GAS2O43903 313 aaKnown RBP11.6□□□□□ -0.55
MBD4-208ENST00000509828 MARCH6O60337 910 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 DDHD2O94830 711 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 SOD2P04179 222 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 ITGA4P13612 1032 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 TARBP2Q15633 366 aaKnown RBP11.6□□□□□ -0.55
MBD4-208ENST00000509828 DCLRE1AQ6PJP8 1040 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 EXOC8Q8IYI6 725 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 CMASQ8NFW8 434 aaPredicted RBP11.6□□□□□ -0.55
MBD4-208ENST00000509828 GPR152Q8TDT2 470 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 SLC7A3Q8WY07 619 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 GJA10Q969M2 543 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 SHDQ96IW2 340 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 RPS6KC1Q96S38 1066 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 COLEC11Q9BWP8 271 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 VN1R3Q9BXE9 311 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 ARHGEF3Q9NR81 526 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 FAM217BQ9NTX9 383 aaPredicted RBP11.6□□□□□ -0.55
MBD4-208ENST00000509828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.6□□□□□ -0.55
MBD4-208ENST00000509828 NCDNQ9UBB6 729 aa11.6□□□□□ -0.55
MBD4-208ENST00000509828 ADAMTS3O15072 1205 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 DKC1O60832 514 aaKnown RBP eCLIP11.59□□□□□ -0.55
MBD4-208ENST00000509828 KINO60870 393 aaKnown RBP11.59□□□□□ -0.55
MBD4-208ENST00000509828 MAFO75444 373 aaPredicted RBP11.59□□□□□ -0.55
MBD4-208ENST00000509828 ERLIN2O94905 339 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 SP9P0CG40 484 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 RCAN1P53805 252 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 AGMOQ6ZNB7 445 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 GET4Q7L5D6 327 aaPredicted RBP11.59□□□□□ -0.55
MBD4-208ENST00000509828 GLYCTKQ8IVS8 523 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 C1orf210Q8IVY1 113 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 CNNM3Q8NE01 707 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 MYADMQ96S97 322 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 HERC2P3Q9BVR0 1158 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 SLC26A6Q9BXS9 759 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 EPS15L1Q9UBC2 864 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 COL4A3BPQ9Y5P4 624 aa11.59□□□□□ -0.55
MBD4-208ENST00000509828 LILRB3O75022 631 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 N4BP1O75113 896 aaKnown RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 RFPL2O75678 378 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 PSMC5P62195 406 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 PLA2G4FQ68DD2 849 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 PHLDB3Q6NSJ2 640 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 Q6ZUG5 572 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 TAS1R1Q7RTX1 841 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 SRGAP1Q7Z6B7 1085 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 MRPL10Q7Z7H8 261 aaKnown RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 HACE1Q8IYU2 909 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 DCLK2Q8N568 766 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 ST13P5Q8NFI4 369 aaPredicted RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 PSPC1Q8WXF1 523 aaKnown RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 BRF1Q92994 677 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 SECISBP2LQ93073 1101 aaKnown RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 LENG9Q96B70 501 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 CEP170P1Q96L14 293 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 APOL6Q9BWW8 343 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 BCO2Q9BYV7 579 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 TRIM6Q9C030 488 aaPredicted RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 SPATA6Q9NWH7 488 aaPredicted RBP11.58□□□□□ -0.56
MBD4-208ENST00000509828 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.56
MBD4-208ENST00000509828 IGKV6-21A0A0C4DH24 114 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 LAMTOR5O43504 91 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 B4GALT3O60512 393 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 PSMD10O75832 226 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 LAMP2P13473 410 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 SDHBP21912 280 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 FSHRP23945 695 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 AFF1P51825 1210 aaKnown RBP11.57□□□□□ -0.56
MBD4-208ENST00000509828 RSPO4Q2I0M5 234 aaPredicted RBP11.57□□□□□ -0.56
MBD4-208ENST00000509828 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 TRIM22Q8IYM9 498 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
MBD4-208ENST00000509828 ATRIPQ8WXE1 791 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 TMEM143Q96AN5 459 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 NT5C3AQ9H0P0 336 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.57□□□□□ -0.56
MBD4-208ENST00000509828 BMP2KQ9NSY1 1161 aaPredicted RBP11.57□□□□□ -0.56
MBD4-208ENST00000509828 NUMBLQ9Y6R0 609 aa11.57□□□□□ -0.56
MBD4-208ENST00000509828 MYH9P35579 1960 aaKnown RBP11.57□□□□□ -0.56
MBD4-208ENST00000509828 ARL5CA6NH57 179 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms