RNA–Protein interactions for RNA: ENST00000509564.1

SDHA-211, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-211ENST00000509564 GJB2P29033 226 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 AXLP30530 894 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 PTENP60484 403 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 NOMO2Q5JPE7 1267 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 HACE1Q8IYU2 909 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 CNNM3Q8NE01 707 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 CDCA3Q99618 268 aaPredicted RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 NFKBIZQ9BYH8 718 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 TLE6Q9H808 572 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 MEIS3P2A8K0S8 358 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 MBTPS2O43462 519 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 ZNF623O75123 536 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 GLP2RO95838 553 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 MUTP22033 750 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 LTBRP36941 435 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 CCT6AP40227 531 aaKnown RBP13.35□□□□□ -0.27
SDHA-211ENST00000509564 ALDH7A1P49419 539 aaKnown RBP13.35□□□□□ -0.27
SDHA-211ENST00000509564 BCAR1P56945 870 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 DLX2Q07687 328 aaPredicted RBP13.35□□□□□ -0.27
SDHA-211ENST00000509564 DUSP6Q16828 381 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 MAEAQ7L5Y9 396 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 CPB2Q96IY4 423 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 NACC1Q96RE7 527 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 GPRC5CQ9NQ84 441 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 PRKAG3Q9UGI9 489 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 IPPQ9Y573 584 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
SDHA-211ENST00000509564 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 NCOR1O75376 2440 aa13.35□□□□□ -0.27
SDHA-211ENST00000509564 XRCC6P12956 609 aaKnown RBP eCLIP13.34□□□□□ -0.27
SDHA-211ENST00000509564 ITGA4P13612 1032 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 ARL2P36404 184 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 MLH1P40692 756 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 ZP2Q05996 745 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 POU5F1BQ06416 359 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 PTGDRQ13258 359 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 PPP2R5AQ15172 486 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 UBXN11Q5T124 520 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 CDCA2Q69YH5 1023 aaPredicted RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 FAM178BQ8IXR5 827 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 SMRP1Q8NCR6 262 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 FAM193BQ96PV7 902 aaPredicted RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 APOL6Q9BWW8 343 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 EIF2AQ9BY44 585 aaKnown RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
SDHA-211ENST00000509564 PHLPP2Q6ZVD8 1323 aa13.34□□□□□ -0.27
SDHA-211ENST00000509564 A0A0C4DFX4 3053 aa13.33□□□□□ -0.27
SDHA-211ENST00000509564 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 NT5C1B-RDH14C9J2C7 533 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 ARF4P18085 180 aaPredicted RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 PRPHP41219 470 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 NAMPTP43490 491 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 ERVFC1P60507 584 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 COASYQ13057 564 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 SMAD2Q15796 467 aaKnown RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 SLC27A1Q6PCB7 646 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 AGMOQ6ZNB7 445 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 TMC7Q7Z402 723 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 TMEM173Q86WV6 379 aaPredicted RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 GJD3Q8N144 294 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 IGSF22Q8N9C0 903 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 DEPTORQ8TB45 409 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 MSLNLQ96KJ4 702 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 RPS6KC1Q96S38 1066 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 ZBP1Q9H171 429 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 CSRNP2Q9H175 543 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 BHMT2Q9H2M3 363 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 NXF3Q9H4D5 531 aaKnown RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 NRDE2Q9H7Z3 1164 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 UBN1Q9NPG3 1134 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
SDHA-211ENST00000509564 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
SDHA-211ENST00000509564 A0A087WWV3 80 aa13.32□□□□□ -0.28
SDHA-211ENST00000509564 PER2O15055 1255 aa13.32□□□□□ -0.28
SDHA-211ENST00000509564 B4GALT5O43286 388 aa13.32□□□□□ -0.28
SDHA-211ENST00000509564 OFD1O75665 1012 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms