RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 HFE2Q6ZVN8 426 aa17.15■□□□□ 0.34
TPM3-219ENST00000509409 DDX53Q86TM3 631 aaKnown RBP17.15■□□□□ 0.34
TPM3-219ENST00000509409 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
TPM3-219ENST00000509409 AUTS2Q8WXX7 1259 aa17.15■□□□□ 0.34
TPM3-219ENST00000509409 TNFRSF25Q93038 417 aa17.15■□□□□ 0.34
TPM3-219ENST00000509409 IGSF21Q96ID5 467 aa17.15■□□□□ 0.34
TPM3-219ENST00000509409 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
TPM3-219ENST00000509409 NEMFO60524 1076 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 ALDH2P05091 517 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 SP100P23497 879 aaPredicted RBP17.14■□□□□ 0.33
TPM3-219ENST00000509409 HOXA11P31270 313 aaPredicted RBP17.14■□□□□ 0.33
TPM3-219ENST00000509409 SLC11A1P49279 550 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 ZXDAP98168 799 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 GIT2Q14161 759 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 TFDP1Q14186 410 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
TPM3-219ENST00000509409 SAFBQ15424 915 aaKnown RBP eCLIP17.14■□□□□ 0.33
TPM3-219ENST00000509409 AGMOQ6ZNB7 445 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 MRPL10Q7Z7H8 261 aaKnown RBP17.14■□□□□ 0.33
TPM3-219ENST00000509409 TMEM173Q86WV6 379 aaPredicted RBP17.14■□□□□ 0.33
TPM3-219ENST00000509409 ZNF280BQ86YH2 543 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 RSAD1Q9HA92 442 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 ANKEF1Q9NU02 776 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 DNAJB4Q9UDY4 337 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 HCFC2Q9Y5Z7 792 aa17.14■□□□□ 0.33
TPM3-219ENST00000509409 A0A087WWV3 80 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 TMEM221A6NGB7 291 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 M0R296 226 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 POMCP01189 267 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 ITGA4P13612 1032 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 GUCY1B3Q02153 619 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 TRIM67Q6ZTA4 783 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 ZBTB33Q86T24 672 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 HSD17B14Q9BPX1 270 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 ZBP1Q9H171 429 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 WDR81Q562E7 1941 aa17.13■□□□□ 0.33
TPM3-219ENST00000509409 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 DGAT1O75907 488 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 DDHD2O94830 711 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 LYPLA2O95372 231 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 CTSAP10619 480 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
TPM3-219ENST00000509409 AXLP30530 894 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 PTENP60484 403 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 ITIH3Q06033 890 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 UBXN11Q5T124 520 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
TPM3-219ENST00000509409 PIGOQ8TEQ8 1089 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 PBXIP1Q96AQ6 731 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 CPB2Q96IY4 423 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 ADAM7Q9H2U9 754 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 XPNPEP1Q9NQW7 623 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 NR2E1Q9Y466 385 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 CNTNAP2Q9UHC6 1331 aa17.12■□□□□ 0.33
TPM3-219ENST00000509409 SEC24BO95487 1268 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 SSBP05455 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
TPM3-219ENST00000509409 MCM7P33993 719 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 AFF1P51825 1210 aaKnown RBP17.11■□□□□ 0.33
TPM3-219ENST00000509409 PCBP1Q15365 356 aaKnown RBP eCLIP17.11■□□□□ 0.336e-17■■□□□ 14.2
TPM3-219ENST00000509409 NOTUMQ6P988 496 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 C12orf76Q8N812 135 aaPredicted RBP17.11■□□□□ 0.33
TPM3-219ENST00000509409 ASAP3Q8TDY4 903 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
TPM3-219ENST00000509409 RIPOR3Q96MK2 946 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 MTMR9Q96QG7 549 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 APOL6Q9BWW8 343 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 EIF2AQ9BY44 585 aaKnown RBP17.11■□□□□ 0.33
TPM3-219ENST00000509409 TRIM6Q9C030 488 aaPredicted RBP17.11■□□□□ 0.33
TPM3-219ENST00000509409 STK39Q9UEW8 545 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 LIMCH1Q9UPQ0 1083 aa17.11■□□□□ 0.33
TPM3-219ENST00000509409 WNT7AO00755 349 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 NRP1O14786 923 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 TSPAN1O60635 241 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 WEE2P0C1S8 567 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 EPCAMP16422 314 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 KLRC2P26717 231 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 MTHFRP42898 656 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 OR1G1P47890 313 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 POU5F1BQ06416 359 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 CABP7Q86V35 215 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 PPFIBP1Q86W92 1011 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 HACE1Q8IYU2 909 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 SMG8Q8ND04 991 aaKnown RBP17.1■□□□□ 0.33
TPM3-219ENST00000509409 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 NECTIN4Q96NY8 510 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 TMEM175Q9BSA9 504 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 EMILIN2Q9BXX0 1053 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 DZANK1Q9NVP4 752 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
TPM3-219ENST00000509409 IPPQ9Y573 584 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms