RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 RXRGP48443 463 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 FXR1P51114 621 aaKnown RBP eCLIP2.68□□□□□ -1.98
PDE4D-218ENST00000509368 SRSF2Q01130 221 aaKnown RBP2.68□□□□□ -1.98
PDE4D-218ENST00000509368 ALDH6A1Q02252 535 aaKnown RBP2.68□□□□□ -1.98
PDE4D-218ENST00000509368 DUSP4Q13115 394 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 SPIDRQ14159 915 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 TTC38Q5R3I4 469 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 KIAA1841Q6NSI8 718 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 LVRNQ6Q4G3 990 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 KCTD1Q719H9 257 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 GPR155Q7Z3F1 870 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 TTC7BQ86TV6 843 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 C7orf31Q8N865 590 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 CCDC89Q8N998 374 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 BCL7CQ8WUZ0 217 aaPredicted RBP2.68□□□□□ -1.98
PDE4D-218ENST00000509368 USP13Q92995 863 aaPredicted RBP2.68□□□□□ -1.98
PDE4D-218ENST00000509368 HDAC10Q969S8 669 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 FERMT2Q96AC1 680 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 MTFMTQ96DP5 389 aaKnown RBP2.68□□□□□ -1.98
PDE4D-218ENST00000509368 BORCS6Q96GS4 357 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 CRB3Q9BUF7 120 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 B3GNT5Q9BYG0 378 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 TUBD1Q9UJT1 453 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 FBXL7Q9UJT9 491 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 SLC13A4Q9UKG4 626 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 TTLL3Q9Y4R7 772 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 MAGI2Q86UL8 1455 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 ABCC2Q92887 1545 aa2.68□□□□□ -1.98
PDE4D-218ENST00000509368 BCORL1Q5H9F3 1711 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 RHPN2P1A8MT19 583 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 FAM155AB1AL88 458 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 J3KRW8 73 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PHGDHO43175 533 aaKnown RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 NRP2O60462 931 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TADA3O75528 432 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 KRT37O76014 449 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 FGF18O76093 207 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 C4BPAP04003 597 aaKnown RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 SPINK2P20155 84 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 POLE2P56282 527 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 FGL2Q14314 439 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 UAP1L1Q3KQV9 507 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PAN2Q504Q3 1202 aaKnown RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 NAT16Q8N8M0 369 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 VPS37AQ8NEZ2 397 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 NETO1Q8TDF5 533 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 SH3RF2Q8TEC5 729 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 CHAMP1Q96JM3 812 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 VPS11Q9H270 941 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 KIAA1586Q9HCI6 787 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PDLIM7Q9NR12 457 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TM7SF3Q9NS93 570 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 RTEL1Q9NZ71 1219 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 GOLGA3Q08378 1498 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 NEO1Q92859 1461 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 A0A087WV62 115 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TCRBV5S4A2TA0A5A2 114 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 UBA6A0AVT1 1052 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 BUB1BO60566 1050 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 FTH1P19P0C7X4 201 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TRHRP34981 398 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 MEF2AQ02078 507 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 MALLQ13021 153 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PKN1Q16512 942 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 KRT77Q7Z794 578 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 NLRP10Q86W26 655 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 SIAH1Q8IUQ4 282 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 CLASRPQ8N2M8 674 aaKnown RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PDILTQ8N807 584 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 OR14C36Q8NHC7 312 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 KLHDC4Q8TBB5 520 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 ZSCAN18Q8TBC5 510 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PLEKHO2Q8TD55 490 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PARD3BQ8TEW8 1205 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 ANKS1AQ92625 1134 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 DPF3Q92784 378 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TBCBQ99426 244 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 CGRRF1Q99675 332 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 LSM14BQ9BX40 385 aaKnown RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TMEM120AQ9BXJ8 343 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 ACE2Q9BYF1 805 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 ADAMTS10Q9H324 1103 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 C19orf44Q9H6X5 657 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 GREM2Q9H772 168 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TMEM8AQ9HCN3 771 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 SERHLQ9NQF3 203 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PAK6Q9NQU5 681 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 CALCOCO1Q9P1Z2 691 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PPARGC1AQ9UBK2 798 aaKnown RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TPCN1Q9ULQ1 816 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 PREX1Q8TCU6 1659 aa2.67□□□□□ -1.98
PDE4D-218ENST00000509368 TTC37Q6PGP7 1564 aa2.66□□□□□ -1.98
PDE4D-218ENST00000509368 GOLGA6L22H0YM25 854 aa2.66□□□□□ -1.98
PDE4D-218ENST00000509368 SCDO00767 359 aa2.66□□□□□ -1.98
PDE4D-218ENST00000509368 IRAK2O43187 625 aa2.66□□□□□ -1.98
PDE4D-218ENST00000509368 ZNF500O60304 480 aaPredicted RBP2.66□□□□□ -1.98
PDE4D-218ENST00000509368 RNASEH2AO75792 299 aaKnown RBP2.66□□□□□ -1.98
PDE4D-218ENST00000509368 DDX58O95786 925 aaKnown RBP2.66□□□□□ -1.98
PDE4D-218ENST00000509368 CSTBP04080 98 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms