RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 ATP2A1O14983 1001 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TLR2O60603 784 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 FLOT1O75955 427 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 CDKL5O76039 1030 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 ATE1O95260 518 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 CBX7O95931 251 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 WNT11O96014 354 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 CEACAM5P06731 702 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 IMPDH2P12268 514 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 POLR2BP30876 1174 aaKnown RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 MCM4P33991 863 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 AK2P54819 239 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 GP2P55259 537 aaKnown RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 GRM1Q13255 1194 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TOB2Q14106 344 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZYXQ15942 572 aaKnown RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 CCDC96Q2M329 555 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 FAM83BQ5T0W9 1011 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TREML2Q5T2D2 321 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TEX2Q8IWB9 1127 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 SPICE1Q8N0Z3 855 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 FAM177A1Q8N128 213 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 FAM43AQ8N2R8 423 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 JMYQ8N9B5 988 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TCEANC2Q96MN5 208 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 SPZ1Q9BXG8 430 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 LRRC2Q9BYS8 371 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 ASCC2Q9H1I8 757 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 TNKS2Q9H2K2 1166 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 EHMT1Q9H9B1 1298 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 PAK6Q9NQU5 681 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 MAD2L2Q9UI95 211 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 CEP131Q9UPN4 1083 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 RABGAP1Q9Y3P9 1069 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 PARP14Q460N5 1801 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 RLFQ13129 1914 aa6.33□□□□□ -1.4
HMGB1P44-201ENST00000508597 GOLGA8AA7E2F4 631 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 GOLGA8BA8MQT2 603 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 VWA5AO00534 786 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 PFKFB2O60825 505 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZBED4O75132 1171 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SLC25A27O95847 323 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SSBP05455 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 CD8BP10966 210 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 CPA1P15085 419 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 PDIA3P30101 505 aaKnown RBP6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 HERVK_113P62684 666 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 CCNA1P78396 465 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 HTRA3P83110 453 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 IKQ13123 557 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 ARHGEF6Q15052 776 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 FAM110CQ1W6H9 321 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 ARSHQ5FYA8 562 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 KIAA1755Q5JYT7 1200 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SYDE2Q5VT97 1194 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 KCTD1Q719H9 257 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 MICU3Q86XE3 530 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SAMD3Q8N6K7 520 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SMCR8Q8TEV9 937 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 NUP133Q8WUM0 1156 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SNX21Q969T3 373 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 Q96M66 194 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 P2RX7Q99572 595 aaKnown RBP6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 RIOX1Q9H6W3 641 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 SLC38A10Q9HBR0 1119 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 RNF186Q9NXI6 227 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 MORF4L1Q9UBU8 362 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 GTF2IRD1Q9UHL9 959 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 CEP350Q5VT06 3117 aa6.32□□□□□ -1.4
HMGB1P44-201ENST00000508597 hCG_1984214I3L0E3 225 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 CPLX1O14810 134 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 UBOX5O94941 541 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 IFNAR1P17181 557 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 GTF2F1P35269 517 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 AKAP17AQ02040 695 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 RBL2Q08999 1139 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 IFI16Q16666 785 aaKnown RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 SFRP5Q5T4F7 317 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 OVOS1Q6IE37 1185 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 TMTC3Q6ZXV5 915 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 ADGRF4Q8IZF3 695 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 ABI1Q8IZP0 508 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 ZNF713Q8N859 430 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 SHCBP1Q8NEM2 672 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 GPRC5AQ8NFJ5 357 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 OR6P1Q8NGX9 317 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 CYB5D2Q8WUJ1 264 aa6.31□□□□□ -1.4
HMGB1P44-201ENST00000508597 WASF1Q92558 559 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms