RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 GJB2P29033 226 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 ALDH7A1P49419 539 aaKnown RBP13.47□□□□□ -0.25
CLDND1-218ENST00000508503 KRT17Q04695 432 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 SMAD2Q15796 467 aaKnown RBP13.47□□□□□ -0.25
CLDND1-218ENST00000508503 DUSP6Q16828 381 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 FAM187BQ17R55 369 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 RILPL1Q5EBL4 403 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 GLB1LQ6UWU2 654 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 SMG8Q8ND04 991 aaKnown RBP13.47□□□□□ -0.25
CLDND1-218ENST00000508503 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
CLDND1-218ENST00000508503 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 FZD8Q9H461 694 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 IGFLR1Q9H665 355 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 TLE6Q9H808 572 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 UBN1Q9NPG3 1134 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 DAXXQ9UER7 740 aaPredicted RBP13.47□□□□□ -0.25
CLDND1-218ENST00000508503 PRKAG3Q9UGI9 489 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 FAM50BQ9Y247 325 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 PCDHGC5Q9Y5F6 944 aa13.47□□□□□ -0.25
CLDND1-218ENST00000508503 FSD2A1L4K1 749 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 INO80B-WBP1J3KQ70 363 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 MBTPS2O43462 519 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 ARF4P18085 180 aaPredicted RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 PBX3P40426 434 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 NRIP1P48552 1158 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 COASYQ13057 564 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 CUL4AQ13619 759 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 CDCA2Q69YH5 1023 aaPredicted RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 NOTUMQ6P988 496 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 POTEGQ6S5H5 508 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 PADI6Q6TGC4 694 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 MICAL1Q8TDZ2 1067 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 POLR3FQ9H1D9 316 aaPredicted RBP13.46□□□□□ -0.25
CLDND1-218ENST00000508503 GPRC5CQ9NQ84 441 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 IRAK3Q9Y616 596 aa13.46□□□□□ -0.25
CLDND1-218ENST00000508503 B4GALT3O60512 393 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 DDHD2O94830 711 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 ERLIN2O94905 339 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 ATP2C1P98194 919 aaPredicted RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 DDX53Q86TM3 631 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 RBM23Q86U06 439 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 ZNF280BQ86YH2 543 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 GJD3Q8N144 294 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 KCTD17Q8N5Z5 321 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 VN1R2Q8NFZ6 395 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 CCDC43Q96MW1 224 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 EIF2AQ9BY44 585 aaKnown RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 RAB34Q9BZG1 259 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 RNF39Q9H2S5 420 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 RSAD1Q9HA92 442 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 CD207Q9UJ71 328 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 IPPQ9Y573 584 aa13.45□□□□□ -0.26
CLDND1-218ENST00000508503 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.45□□□□□ -0.26
CLDND1-218ENST00000508503 ARHGEF35A5YM69 484 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 HIDE1A8MVS5 230 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 PER2O15055 1255 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 EFEMP2O95967 443 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 ALDH2P05091 517 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 ITGA4P13612 1032 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 ZP2Q05996 745 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 HYIQ5T013 277 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 EP400NLQ6ZTU2 488 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 TMC7Q7Z402 723 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 TMEM173Q86WV6 379 aaPredicted RBP13.44□□□□□ -0.26
CLDND1-218ENST00000508503 ADHFE1Q8IWW8 467 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 SMRP1Q8NCR6 262 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 GSTCDQ8NEC7 633 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■■■□□ 15
CLDND1-218ENST00000508503 CPB2Q96IY4 423 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 TCF25Q9BQ70 676 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 TMEM175Q9BSA9 504 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 SMC3Q9UQE7 1217 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 GIT1Q9Y2X7 761 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 ZMYM2Q9UBW7 1377 aa13.44□□□□□ -0.26
CLDND1-218ENST00000508503 C2orf71A6NGG8 1288 aa13.43□□□□□ -0.26
CLDND1-218ENST00000508503 ARL5CA6NH57 179 aa13.43□□□□□ -0.26
CLDND1-218ENST00000508503 PI4K2BG5E9Z4 385 aa13.43□□□□□ -0.26
CLDND1-218ENST00000508503 B4GALT5O43286 388 aa13.43□□□□□ -0.26
CLDND1-218ENST00000508503 ZC3H11AO75152 810 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms