RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MED24O75448 989 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 DDHD2O94830 711 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 GALTP07902 379 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 SKIP12755 728 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 GLRA2P23416 452 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 KRT17Q04695 432 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 CAPSQ13938 189 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 AMHR2Q16671 573 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 NOMO2Q5JPE7 1267 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 SYCE2Q6PIF2 218 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 TMC7Q7Z402 723 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 CATSPER3Q86XQ3 398 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 IFNLR1Q8IU57 520 aaPredicted RBP18.06■□□□□ 0.48
LMNA-222ENST00000508500 MRPL43Q8N983 215 aaKnown RBP18.06■□□□□ 0.48
LMNA-222ENST00000508500 FBXO18Q8NFZ0 1043 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 VN1R3Q9BXE9 311 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 NGRNQ9NPE2 291 aaKnown RBP18.06■□□□□ 0.48
LMNA-222ENST00000508500 INPP5FQ9Y2H2 1132 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 MTCL1Q9Y4B5 1905 aaKnown RBP18.06■□□□□ 0.48
LMNA-222ENST00000508500 C2orf71A6NGG8 1288 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 DGAT1O75907 488 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 SLC11A1P49279 550 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 ALDH7A1P49419 539 aaKnown RBP18.05■□□□□ 0.48
LMNA-222ENST00000508500 POU5F1BQ06416 359 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 ZNF174Q15697 407 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 LLGL2Q6P1M3 1020 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 GLB1LQ6UWU2 654 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 C4orf32Q8N8J7 132 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 SUSD6Q92537 303 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 CPB2Q96IY4 423 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 EIF2AQ9BY44 585 aaKnown RBP18.05■□□□□ 0.48
LMNA-222ENST00000508500 KCNH6Q9H252 994 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
LMNA-222ENST00000508500 FOXP1Q9H334 677 aaPredicted RBP18.05■□□□□ 0.48
LMNA-222ENST00000508500 LOC730098B7Z3J9 87 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 NCLP19338 710 aaKnown RBP18.04■□□□□ 0.48
LMNA-222ENST00000508500 TECP42680 631 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
LMNA-222ENST00000508500 MBTD1Q05BQ5 628 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 MXD4Q14582 209 aaPredicted RBP18.04■□□□□ 0.48
LMNA-222ENST00000508500 NBR1Q14596 966 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 SAFBQ15424 915 aaKnown RBP eCLIP18.04■□□□□ 0.48
LMNA-222ENST00000508500 ANKRD54Q6NXT1 300 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 HFE2Q6ZVN8 426 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 RNF135Q8IUD6 432 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 AUTS2Q8WXX7 1259 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 PGBD4Q96DM1 585 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 IGSF21Q96ID5 467 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 ZSCAN31Q96LW9 406 aaPredicted RBP18.04■□□□□ 0.48
LMNA-222ENST00000508500 ZBP1Q9H171 429 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 RSAD1Q9HA92 442 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 GPRC5CQ9NQ84 441 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 CDH22Q9UJ99 828 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 MYH11P35749 1972 aa18.04■□□□□ 0.48
LMNA-222ENST00000508500 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 CLASP2O75122 1294 aaKnown RBP18.03■□□□□ 0.48
LMNA-222ENST00000508500 XRCC6P12956 609 aaKnown RBP eCLIP18.03■□□□□ 0.48
LMNA-222ENST00000508500 SMC1AQ14683 1233 aaKnown RBP18.03■□□□□ 0.48
LMNA-222ENST00000508500 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 RSPH1Q8WYR4 309 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 TMEM169Q96HH4 297 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 APOL5Q9BWW9 433 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 TUFT1Q9NNX1 390 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 MIOSQ9NXC5 875 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 MUTYHQ9UIF7 546 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 IPPQ9Y573 584 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 HCFC2Q9Y5Z7 792 aa18.03■□□□□ 0.48
LMNA-222ENST00000508500 INO80B-WBP1J3KQ70 363 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 B4GALT5O43286 388 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 USO1O60763 962 aaKnown RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 CXCL14O95715 111 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 POMCP01189 267 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 OR52Z1P0C646 297 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 ARF4P18085 180 aaPredicted RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 TOB1P50616 345 aaPredicted RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 HMGN5P82970 282 aaKnown RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 NHLH1Q02575 133 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 CBX2Q14781 532 aaPredicted RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 ECM1Q16610 540 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 TTC38Q5R3I4 469 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 MAEAQ7L5Y9 396 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 DDX53Q86TM3 631 aaKnown RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 NOSTRINQ8IVI9 506 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 FEZF2Q8TBJ5 459 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 FBXL18Q96ME1 805 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 POP1Q99575 1024 aaKnown RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 POLR3CQ9BUI4 534 aaPredicted RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 POLR3FQ9H1D9 316 aaPredicted RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 SH2B1Q9NRF2 756 aaPredicted RBP18.02■□□□□ 0.48
LMNA-222ENST00000508500 HES2Q9Y543 173 aa18.02■□□□□ 0.48
LMNA-222ENST00000508500 CNTNAP2Q9UHC6 1331 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 FSD2A1L4K1 749 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 ERLIN2O94905 339 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 AXLP30530 894 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 RNASELQ05823 741 aaKnown RBP18.01■□□□□ 0.47
LMNA-222ENST00000508500 POTEGQ6S5H5 508 aa18.01■□□□□ 0.47
LMNA-222ENST00000508500 CDR2LQ86X02 465 aaPredicted RBP18.01■□□□□ 0.47
LMNA-222ENST00000508500 PHF7Q9BWX1 381 aaPredicted RBP18.01■□□□□ 0.47
LMNA-222ENST00000508500 NFKBIZQ9BYH8 718 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms